Protein Alignment psq and Nacc2

DIOPT Version :9

• Sequence 1: NP_001369078.1
• Gene: psq / 36118
• FlyBaseID: FBgn0263102
• Length: 1170
• Species: Drosophila melanogaster
• Sequence 2: NP_001094003.1
• Gene: Nacc2 / 296583
• RGDID: 1309292
• Length: 585
• Species: Rattus norvegicus
• Alignment Length: 613
• Identity: 116/613 - (18%)
• Similarity: 205/613 - (33%)
• Gaps: 177/613 - (28%)

  Fly    16 NYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADI 80
            |:.||:.....:.|....:.||::..:..:.|||:.||:|.|.||:.|...|  ......||..:
  Rat    11 NFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFSGN--SKSAFELPGTV 73

  Fly    81 IFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLN--------DAATATI 137
            .....:.|:.|.|.|::.:..||...::.||..|:|:.:   .|...||.        |:.||.|
  Rat    74 PPACFQQILSFCYTGKLTMAASEQLVVMYTAGFLQIQHI---VERGTDLMFKVSSPHCDSQTAMI 135

  Fly   138 TVSENIQQAVVGNIVNA----AIVPGAPSPSLEQQQQHHQQQQQQQAQEQHQQQQVHAQQQQQQQ 198
            ..:.:..|:....:..|    |..|..|.|.|.:.:  |:..:...|
  Rat   136 EDASSEPQSPCNQLQPATAAYATSPSVPIPLLTRVK--HEAMEMPPA------------------ 180

  Fly   199 QQINAALLTQHGVSSGSVSLSGQLLSSSASGSSG------------------SLAGGQQASQTPS 245
              ....|.::..:.:|  ...|..:::.|:|:.|                  :|....|....|.
  Rat   181 --TGPGLASKRPLDTG--PRDGVAVATGAAGTPGTAPLKLPRVSYYGVPSLATLIPSIQQVPYPQ 241

  Fly   246 GLQPTPRKSRLKRSKSP--------------DLSSGGGAGSSGGSSSG--STQQQPQPAHHHHPQ 294
            |.:.:|..|.|..:.||              |.......|.....::|  :.|::|:|.......
  Rat   242 GERTSPGASSLPTTDSPTSYHNEDEDDDEAYDTMVEEQYGQMYIKATGNYAVQEKPEPVPLESRS 306

  Fly   295 TILIQGQ---NPNSIVSLQQTADGNYIPVSGSGDDSDAEDHEHEHNHGHG----HGHGGHTHGHG 352
            .:||:..   .|.|::|  |.....:..:...||..:    :.|...|.|    .|...:.|
  Rat   307 CVLIRRDLVALPASLIS--QIGYRCHPKLYSEGDPGE----KLELVAGSGVYITRGQLMNCH--- 362

  Fly   353 HSHEHSHDHEHEHKPNKICK-TEHSV------ASPASNSSSASNNAAGVSGVTS------TGQAI 404
                             :|. .:|.|      |:....::.|::...|:...||      ....:
  Rat   363 -----------------LCAGVKHKVLLRRLLATFFDRNTLANSCGTGIRSSTSDPSRKPLDSRV 410

  Fly   405 VTQI-----------------VVARDG------------KDTKNMTSLGMGMNGGLLGVPMGFLD 440
            :..:                 |:|.|.            ...|:|...|:.|...::|.....|.
  Rat   411 LNAVKLYCQNFAPSFKESEMNVIAADMCTNARRVRKRWLPKIKSMLPEGVEMYRSVMGASAASLP 475

  Fly   441 FTPEPPA----------------PSATPV---TVTEHVDL--SCNPSTDTRDLSNTTEPLDIDNH 484
            ..||.|:                .:||.|   |...:|||  |.||:.:      ..|.:|....
  Rat   476 LDPEFPSAASQVFEQRIYAERRNDAATIVALRTDAVNVDLSTSANPAFE------ANEEVDGAGS 534

  Fly   485 LAQQIHRLDQSPMHSISHHHTGDESNSN 512
            :.|::...:|.|....|.....::.|::
  Rat   535 VIQEVAAPEQLPADGQSSPQAFEQGNTS 562

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
psq	NP_001369078.1	BTB_POZ_BAB-like	34..118	CDD:349624	25/83 (30%)
		HTH_psq	717..>747	CDD:283007
		HTH_psq	767..804	CDD:283007
		HTH_psq	821..866	CDD:283007
		HTH_psq	873..916	CDD:283007
Nacc2	NP_001094003.1	BTB_POZ_BTBD14A_NAC2	1..131	CDD:349598	33/124 (27%)
		PHA03247	<138..260	CDD:223021	24/145 (17%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	238..269		7/30 (23%)
		BEN	370..447	CDD:214981	9/76 (12%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	541..585		4/22 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	74	1.000	Inparanoid score	I5180
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.960