DRSC/TRiP Functional Genomics Resources

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Protein Alignment psq and LOC1279495

DIOPT Version :10

Sequence 1:NP_001369078.1 Gene:psq / 36118 FlyBaseID:FBgn0263102 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_061517091.1 Gene:LOC1279495 / 1279495 VectorBaseID:AGAMI1_012151 Length:531 Species:Anopheles gambiae


Alignment Length:490 Identity:125/490 - (25%)
Similarity:210/490 - (42%) Gaps:104/490 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHP 72
            |.||||||:|.:.:...|:.||.:...|||||.||...::|||:||||||:||:.:..|||.:||
Mosquito     5 QSFSLRWNDYSSHIARAFESLRYEEDLVDVTLYCEGRRIRAHKMVLSACSSYFKDIFKENPSQHP 69

  Fly    73 TIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADD-----LNDA 132
            .||. .::.::||.::::|:|:||:.|.:..|...|.|||.|.::||.:|.:..:.     ::|.
Mosquito    70 IIIF-KNVKYSDLVSLVEFMYQGEVVVLQESLPSFLHTAELLSVRGLADTCDTIEQHLHSTISDQ 133

  Fly   133 ATATI------TVSENIQQAVV---------------------------------------GNIV 152
            .|:::      |.|.|:..|.:                                       .|.:
Mosquito   134 PTSSLAQQILQTQSRNMNNATITTEPVYFTLPSNSTIVPQIKIESQPPASQQLINKILLKSSNDI 198

  Fly   153 NAA----IVPGAPSPSLEQQQQHHQQQQQQQAQ------EQHQQQQVHAQQQQQQQQQINAALLT 207
            .||    |||.|...  :||||.|.|...||.|      :|.||.|:..|...::|.|.|..|..
Mosquito   199 TAALGNTIVPQAQQQ--QQQQQTHSQAHLQQPQPSTTATQQQQQPQLQTQTTIREQHQPNLVLKA 261

  Fly   208 QHGVSSGSVSLSGQLLSSSASGSSGSLAGGQQASQTPSGLQ-------PTPRKSRLKR-SKSPDL 264
            .|.|:..::   ||.:.:..|.|...    |...|:.:.||       ..||..:::| ||..|.
Mosquito   262 SHSVTMPTL---GQPIVAHGSASQPD----QNKQQSATALQDLVESVISMPRPVKIERVSKQKDT 319

  Fly   265 SS--GGGAGSSGGSSSGSTQQQPQPAHHHHPQTILIQGQNPNSIVSL----QQTADGNYIPVSGS 323
            |:  ...|.:...:|:.:.:.:|..::.....|.....|..||.:.:    .|:.:.:|...:|:
Mosquito   320 STLPTTTAATKQATSTAAVEIKPSTSYTSLSTTTNTANQAANSGMDMYEQVPQSHETSYTANTGN 384

  Fly   324 GDDSDAEDHEHEH-NHGHGHGHGGHTHGHGHSHEHSHDHEHEHKPNKICKTEHSVASPASNSSSA 387
            |   :.:.|..|. |.|.............::|....:..:|:.||: .:.:.::...:......
Mosquito   385 G---EVKLHISEFINVGESMATTSGGDSSTYTHPEGFELVNENIPNR-SEPDETIEPSSFEMEIV 445

  Fly   388 SNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTS 422
            ..:.||               :...:|..||..|:
Mosquito   446 DMDVAG---------------IFPDEGSTTKETTN 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psqNP_001369078.1 BTB_POZ_BAB-like 34..118 CDD:349624 38/83 (46%)
HTH_psq 717..>747 CDD:283007
HTH_psq 767..804 CDD:283007
HTH_psq 821..866 CDD:283007
HTH_psq 873..916 CDD:283007
LOC1279495XP_061517091.1 None
Blue background indicates that the domain is not in the aligned region.

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