DRSC/TRiP Functional Genomics Resources

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Protein Alignment psq and Btbd18

DIOPT Version :9

Sequence 1:NP_001369078.1 Gene:psq / 36118 FlyBaseID:FBgn0263102 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:347 Identity:85/347 - (24%)
Similarity:132/347 - (38%) Gaps:85/347 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YQNT--MTSVFQQLREDLS---FVDVTLSCEHGSLKAHKVVLSACSTYF-QKLLLENPCKHPTII 75
            |:|.  :...|.||.....   |.|..|..|..::.||..:|||||.:| ::|..|.|.:...::
Mouse    11 YRNPRFLRVAFLQLHHQQQSGVFCDALLQAEGEAVPAHCCILSACSPFFTERLERERPVQGRKVV 75

  Fly    76 LP-ADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAE--------------- 124
            |. ..:....|:.::||:|..|::|::.|.|.:|..|.||::..| ||.:               
Mouse    76 LEMGGLKIQTLRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVSEL-ETLQLEGGKLVKAPQGRRL 139

  Fly   125 NADDLNDAATATITVSENIQQAVVGNIVNAAIVPGAPSP--------------SLEQQQQHHQQQ 175
            |.:.|...|.|.|:          ..:|.....|..|.|              ||.:::..|::.
Mouse   140 NRECLQPPAAAPIS----------ARVVGPKSRPQTPLPVTQTPSPLGAVRLKSLGEEEGAHKKT 194

  Fly   176 QQQQAQEQHQQQQVHAQQQQQQQQQINAALLTQHGVSSGSVSLSGQLLSSSASGSSGSLAGGQQA 240
            ....|...       :..|.:::.::   .|||...||.|....|...:.|..|.:.        
Mouse   195 NLPNADSL-------SDTQLKKKARV---CLTQESRSSPSSQREGPKETKSNPGPTA-------- 241

  Fly   241 SQTPSGLQPT------PRKSRLKRSK-SPDLSSGGGAGSSGGSSSGSTQQQPQPAHHHHPQTIL- 297
              .|| |.|:      |||.||.||| ||.:.:...:....|.||..|    .|......|..: 
Mouse   242 --LPS-LYPSVDEQLLPRKIRLSRSKPSPHVYTSTPSSILSGPSSMPT----APGRRLWRQRTVS 299

  Fly   298 -----IQGQNPNSIVSLQQTAD 314
                 :..|.|..:..||.|.|
Mouse   300 KEAQGVDKQKPGEVRPLQSTPD 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psqNP_001369078.1 BTB_POZ_BAB-like 34..118 CDD:349624 28/85 (33%)
HTH_psq 717..>747 CDD:283007
HTH_psq 767..804 CDD:283007
HTH_psq 821..866 CDD:283007
HTH_psq 873..916 CDD:283007
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 34/118 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 38/159 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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