DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment psq and zbtb21

DIOPT Version :10

Sequence 1:NP_001369078.1 Gene:psq / 36118 FlyBaseID:FBgn0263102 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001090699.1 Gene:zbtb21 / 100036678 XenbaseID:XB-GENE-995449 Length:1030 Species:Xenopus tropicalis


Alignment Length:348 Identity:76/348 - (21%)
Similarity:134/348 - (38%) Gaps:69/348 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADII 81
            :.::|.|...:.|....|.||.|.......:|||.:|:|.|.|||.|..|...:..|:.   .:.
 Frog    12 HASSMLSALNEERLKEEFCDVLLIVGDQKFRAHKNILAATSEYFQSLFTEKDNESQTVF---QLD 73

  Fly    82 FTD---LKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENI 143
            |.|   .:.:::::|...|.|.:|.|..:......|.|..|.                       
 Frog    74 FCDADVFENVLNYIYSSSIFVEKSSLAAVQELGYSLGINFLT----------------------- 115

  Fly   144 QQAVVGNIVNAAIVPGAPSPSLEQQQ-QHHQQQQQQQAQEQHQQQQVHAQQQ------QQQQQQI 201
                  |||:.  .|..|.||::..: :...:...||......|.::.||::      ..:.:.:
 Frog   116 ------NIVSK--TPQTPFPSIKNAEFKEEDESGSQQRSVIVCQNRIEAQERDISHLHHDKSRPL 172

  Fly   202 NAALLTQHGVSSGS-----VSLSGQLLSSSASGSSGSLAGGQQASQTPSGLQPTPRKSRLKRSKS 261
            ..:||.| |.:.|:     :|.....|.|.....:..::..|..|::      ..|||.|.:...
 Frog   173 KPSLLPQ-GKTHGNRPLMRLSEPPNSLLSERKWRNSYVSDDQGISRS------VKRKSTLPQKSF 230

  Fly   262 PDLSSGGGAGSSG---GSSSGSTQQQ------PQPAHHHHPQTILIQGQNPNSIVSLQQTADGNY 317
            |.|.|....|.||   .::|.:.::|      |..:...:|.:.||:|:..   |.:::..:.|.
 Frog   231 PSLESNDKPGISGCLLRNTSETFEKQMLASVPPSYSSSEYPYSSLIRGKES---VPIKEEEEENV 292

  Fly   318 IPVSGSGDDSDA-EDHEHEHNHG 339
            :..|..|..|.| ..|::....|
 Frog   293 VYYSKVGLTSSAGSTHQNTDRSG 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psqNP_001369078.1 BTB_POZ_BAB-like 34..118 CDD:349624 25/86 (29%)
HTH_psq 717..>747 CDD:283007
HTH_psq 767..804 CDD:283007
HTH_psq 821..866 CDD:283007
HTH_psq 873..916 CDD:283007
zbtb21NP_001090699.1 BTB_POZ_ZBTB21_ZNF295 12..123 CDD:349518 32/144 (22%)
C2H2 Zn finger 514..535 CDD:275368
C2H2 Zn finger 637..657 CDD:275368
zf_C2H2_6 711..738 CDD:408245
C2H2 Zn finger 875..895 CDD:275370
C2H2 Zn finger 903..924 CDD:275370
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.