DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pef and AT5G04170

DIOPT Version :10

Sequence 1:NP_610592.1 Gene:Pef / 36111 FlyBaseID:FBgn0033529 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_196037.2 Gene:AT5G04170 / 830295 AraportID:AT5G04170 Length:354 Species:Arabidopsis thaliana


Alignment Length:239 Identity:78/239 - (32%)
Similarity:106/239 - (44%) Gaps:49/239 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SYGQGYNPYAQP---GGGY-APPP-------------------------GAFPPQNAQVSPQAQ- 36
            |||.|..| :||   |||| |.||                         |.:|||.:..||.|. 
plant   112 SYGAGPRP-SQPSGHGGGYGATPPHGVSDYGSYGGAPPRPASSGHGGGYGGYPPQASYGSPFASL 175

  Fly    37 --------------QWFSMVDRDRSGKINASELQAALVNGRGDHFSDNACKLMISMFDNDASGTI 87
                          ..|...|:|.||.|:..|||.|| :.....||.....|::.:|.|..:..|
plant   176 IPSGFAPGTDPNIVACFQAADQDGSGFIDDKELQGAL-SSYQQRFSMRTVHLLMYLFTNSNAMKI 239

  Fly    88 DIYEFEKLYNYINQWLQVFKTYDQDSSGHIEEQELTQAFTQMGFRFSPEFINFLVKKSDPQGHKE 152
            ...||..|:..:..|..:|:..|:|.||.|:..||..|...:||..||..::.||.|.|..|.|.
plant   240 GPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFDKSGGKN 304

  Fly   153 --VSVDQFIVLCVQVQRFTEAFRQRDTQQNGTITIGFEDF-LTV 193
              :..|.||..|:.|:..||.|:::||..:|:.|..:|.| |||
plant   305 RAIEYDNFIECCLTVKGLTEKFKEKDTAYSGSATFNYESFMLTV 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PefNP_610592.1 EFh_PEF_peflin 34..198 CDD:320059 58/178 (33%)
EF-hand motif 34..63 CDD:320059 12/43 (28%)
EF-hand motif 71..100 CDD:320059 7/28 (25%)
EF-hand motif 101..131 CDD:320059 10/29 (34%)
EF-hand motif 137..166 CDD:320059 10/30 (33%)
EF-hand motif 167..198 CDD:320059 12/28 (43%)
AT5G04170NP_196037.2 EFh_PEF_Group_I 187..351 CDD:320055 57/163 (35%)
EF-hand motif 187..215 CDD:320055 11/28 (39%)
EF-hand motif 223..252 CDD:320055 7/28 (25%)
EF-hand motif 253..282 CDD:320055 10/28 (36%)
EF-hand motif 289..320 CDD:320055 10/30 (33%)
EF-hand motif 321..351 CDD:320055 12/28 (43%)

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