DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pef and CAPN3

DIOPT Version :10

Sequence 1:NP_610592.1 Gene:Pef / 36111 FlyBaseID:FBgn0033529 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_000061.1 Gene:CAPN3 / 825 HGNCID:1480 Length:821 Species:Homo sapiens


Alignment Length:206 Identity:58/206 - (28%)
Similarity:95/206 - (46%) Gaps:18/206 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GYNPYAQPGGGYAPP------PGAFPPQNAQVSPQAQQW---FSMVDRDRSGKINASELQAAL-- 59
            |.:..::.|.|...|      |...|..:.|.|.:.||:   |..:..| ..:|.|.||:..|  
Human   616 GVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIAGD-DMEICADELKKVLNT 679

  Fly    60 -VNGRGD---H-FSDNACKLMISMFDNDASGTIDIYEFEKLYNYINQWLQVFKTYDQDSSGHIEE 119
             ||...|   | |:..:|:.||::.|.|.||.:::.||..|:|.|..|.::||.||.|.||.|..
Human   680 VVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTDQSGTINS 744

  Fly   120 QELTQAFTQMGFRFSPEFINFLVKKSDPQGHKEVSVDQFIVLCVQVQRFTEAFRQRDTQQNGTIT 184
            .|:..|....||..:.:..:.:..:...: |..:..|.||...|:::....||...|...:|.|.
Human   745 YEMRNAVNDAGFHLNNQLYDIITMRYADK-HMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIK 808

  Fly   185 IGFEDFLTVAI 195
            :...::|.:.:
Human   809 LNVLEWLQLTM 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PefNP_610592.1 EFh_PEF_peflin 34..198 CDD:320059 50/172 (29%)
EF-hand motif 34..63 CDD:320059 11/34 (32%)
EF-hand motif 71..100 CDD:320059 11/28 (39%)
EF-hand motif 101..131 CDD:320059 11/29 (38%)
EF-hand motif 137..166 CDD:320059 5/28 (18%)
EF-hand motif 167..198 CDD:320059 6/29 (21%)
CAPN3NP_000061.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 7..37
Peptidase_C2 75..415 CDD:459889
Domain III 418..586
Calpain_III 435..574 CDD:460050
Calpain_u2 583..653 CDD:465216 8/36 (22%)
Linker 587..649 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 609..652 8/35 (23%)
Domain IV 650..821 50/172 (29%)
EFh_PEF_CAPN3 653..821 CDD:320065 49/169 (29%)
EF-hand motif 653..681 CDD:320065 8/28 (29%)
EF-hand motif 696..725 CDD:320065 11/28 (39%)
EF-hand motif 726..756 CDD:320065 11/29 (38%)
EF-hand motif 761..790 CDD:320065 5/29 (17%)
EF-hand motif 791..821 CDD:320065 6/29 (21%)
Blue background indicates that the domain is not in the aligned region.

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