DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pef and sri

DIOPT Version :10

Sequence 1:NP_610592.1 Gene:Pef / 36111 FlyBaseID:FBgn0033529 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001016667.1 Gene:sri / 549421 XenbaseID:XB-GENE-952117 Length:195 Species:Xenopus tropicalis


Alignment Length:199 Identity:75/199 - (37%)
Similarity:105/199 - (52%) Gaps:18/199 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSYGQGYNPYAQPG----GGYAPPPGAFPPQNAQVSPQAQQWFSMVDRDRSGKINASELQAAL-- 59
            |:|     |..|||    |||...||. |....|..|....:.|:..:|  |:|:|.|||..|  
 Frog     1 MAY-----PGQQPGGYYQGGYGGAPGG-PAYGQQQDPMYGYFASIAGQD--GQIDADELQRCLTQ 57

  Fly    60 --VNGRGDHFSDNACKLMISMFDNDASGTIDIYEFEKLYNYINQWLQVFKTYDQDSSGHIEEQEL 122
              ::|....||...|:|||:|.|.|.||.:...||::|...||.|.|.|.|||.|.||.:|..||
 Frog    58 AGLSGGYKPFSLETCRLMIAMLDRDMSGKMGFNEFKELGMVINGWRQHFMTYDGDRSGTVEGHEL 122

  Fly   123 TQAFTQMGFRFSPEFINFLVKKSDPQGHKEVSVDQFIVLCVQVQRFTEAFRQRDTQQNGTITIGF 187
            ..|...||:|.||:.:|.:.|:....|  .:|.|.:|..||:::..|:.||:||..|.|.:...:
 Frog   123 HAALGAMGYRLSPQALNNIAKRYSTNG--RISFDDYITCCVKLRALTDMFRRRDVSQQGVVNFQY 185

  Fly   188 EDFL 191
            :||:
 Frog   186 DDFI 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PefNP_610592.1 EFh_PEF_peflin 34..198 CDD:320059 61/162 (38%)
EF-hand motif 34..63 CDD:320059 9/32 (28%)
EF-hand motif 71..100 CDD:320059 12/28 (43%)
EF-hand motif 101..131 CDD:320059 14/29 (48%)
EF-hand motif 137..166 CDD:320059 8/28 (29%)
EF-hand motif 167..198 CDD:320059 9/25 (36%)
sriNP_001016667.1 EFh_PEF_sorcin 31..195 CDD:320062 62/163 (38%)
EF-hand motif 31..59 CDD:320062 10/29 (34%)
EF-hand motif 71..100 CDD:320062 12/28 (43%)
EF-hand motif 101..131 CDD:320062 14/29 (48%)
EF-hand motif 137..164 CDD:320062 8/28 (29%)
EF-hand motif 165..195 CDD:320062 9/25 (36%)

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