DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pef and sol

DIOPT Version :10

Sequence 1:NP_610592.1 Gene:Pef / 36111 FlyBaseID:FBgn0033529 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster


Alignment Length:237 Identity:43/237 - (18%)
Similarity:73/237 - (30%) Gaps:85/237 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AQPGGGYAPPPGAFPPQNAQVSPQAQQWFSMVDRDRSGKINASELQAALV----------NGRGD 65
            |..|||           |.:|..:..|...:..|.....::..::|...:          :.|||
  Fly  1222 ASCGGG-----------NMKVDEEEYQQKGLRPRHAYSVLDVKDIQGHRLLKLRNPWGHYSWRGD 1275

  Fly    66 HFSDNAC---KLMISMFDNDASGTIDIYEFEKLYNYI---------NQWLQV------------- 105
            ...|::.   .|..::..:.||..:....||.:.||.         :.|.:|             
  Fly  1276 WSDDSSLWTDDLRDALMPHGASEGVFWISFEDVLNYFDCIDICKVRSGWNEVRLQGTLQPLCSIS 1340

  Fly   106 -------------FKTYDQDSSGHIEEQELTQAFTQMGFR----FSPEFINFLVKKSDPQ----- 148
                         |..:.:......:.|........:.||    .:|| |..||:.|..|     
  Fly  1341 CVLLTVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVIFRTRSPAAPE-IGRLVEHSKRQVRGFV 1404

  Fly   149 -GHKEVSVDQFIVLCVQVQRFTEAFRQRDTQQNGTITIGFED 189
             .||.:..|.::::|:       ||....|        |.||
  Fly  1405 GCHKMLERDIYLLVCL-------AFNHWHT--------GIED 1431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PefNP_610592.1 EFh_PEF_peflin 34..198 CDD:320059 37/214 (17%)
EF-hand motif 34..63 CDD:320059 3/38 (8%)
EF-hand motif 71..100 CDD:320059 7/40 (18%)
EF-hand motif 101..131 CDD:320059 4/55 (7%)
EF-hand motif 137..166 CDD:320059 9/34 (26%)
EF-hand motif 167..198 CDD:320059 6/23 (26%)
solNP_476738.3 zf-RanBP 6..34 CDD:395516
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:395516
zf-RanBP 643..672 CDD:395516
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:395516
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:395516
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:395516
CysPc 1001..1328 CDD:128526 21/116 (18%)
Blue background indicates that the domain is not in the aligned region.

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