DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17765 and clp-6

DIOPT Version :9

Sequence 1:NP_610592.1 Gene:CG17765 / 36111 FlyBaseID:FBgn0033529 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_500081.2 Gene:clp-6 / 190738 WormBaseID:WBGene00000546 Length:627 Species:Caenorhabditis elegans


Alignment Length:165 Identity:31/165 - (18%)
Similarity:59/165 - (35%) Gaps:29/165 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NAQVSPQAQQWFSMVDRDRSGKI-----NASELQAALVNGRGDHFSDNACKLMISMFDNDASGTI 87
            |...|.::..| ..||:::..|:     ...|....|.:......:.:.|.|...:...    ..
 Worm   401 NGDWSDKSSLW-EQVDQEQREKMEFRIKEDGEFWMCLDDFMAQFANLDCCNLSADVMHE----IT 460

  Fly    88 DIYEFEKLYNYINQWLQVFKTYD------QDSSGHIEEQELTQAFTQMGFRFSPEFINFLVKKSD 146
            ::.|.|.:.....||:|  |:.|      :.::|.....|.|       |..:|::..:. :.:.
 Worm   461 EMTEIEVMEKQSKQWIQ--KSADGEWCSRKGTAGGCSNNENT-------FCTNPQYETYF-RATS 515

  Fly   147 PQGHKEVSVDQFIVLCVQVQRFTEAFRQRDTQQNG 181
            |..:.:.:|   |....|..|..:..|..|..|.|
 Worm   516 PSSNDKCTV---IAAVFQKYRRNQLHRGLDMLQIG 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17765NP_610592.1 FRQ1 26..162 CDD:227455 25/144 (17%)
EFh 39..92 CDD:238008 7/57 (12%)
EFh 105..159 CDD:298682 9/59 (15%)
clp-6NP_500081.2 Peptidase_C2 158..450 CDD:366222 8/49 (16%)
Calpain_III 473..624 CDD:238132 19/88 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158994
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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