DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pef and clpr-4

DIOPT Version :10

Sequence 1:NP_610592.1 Gene:Pef / 36111 FlyBaseID:FBgn0033529 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_492903.2 Gene:clpr-4 / 190249 WormBaseID:WBGene00013184 Length:308 Species:Caenorhabditis elegans


Alignment Length:175 Identity:36/175 - (20%)
Similarity:63/175 - (36%) Gaps:34/175 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 WFSMVDRDRSG------KINASELQAALV-NGRGDHFSDNACKLMISMFDNDASGTI-DIYEFEK 94
            |..:|:...:|      |::..|..|..: |..|...:.....|...:|:|.....| :.:..:|
 Worm   125 WDMIVEAHLAGFLLCTSKLSLDEESAEYIFNSTGIKQNHAYAILNSVVFENHRLVQIGNTHACDK 189

  Fly    95 LYNYINQWLQVFKTYDQDSS--------GHIEEQELTQAFTQMGFRFSP----EF------INFL 141
            ......:|..:...|::.||        .|:::........|....||.    |:      |.|.
 Worm   190 WKELHKEWNSLHYFYNKFSSKLPRRPYISHLDDMSFWMDIDQYCEHFSSLTVCEYRKDWKEIRFR 254

  Fly   142 ----VKKSDPQGHKEVSVDQFIVLCVQVQRFTEA----FRQRDTQ 178
                :|:|.......::||:...|.|:|.....|    .|.|||:
 Worm   255 QTNDLKQSRETEALRMTVDRRCELVVEVTDRVLAKIWVTRNRDTE 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PefNP_610592.1 EFh_PEF_peflin 34..198 CDD:320059 36/175 (21%)
EF-hand motif 34..63 CDD:320059 7/31 (23%)
EF-hand motif 71..100 CDD:320059 5/29 (17%)
EF-hand motif 101..131 CDD:320059 6/37 (16%)
EF-hand motif 137..166 CDD:320059 8/38 (21%)
EF-hand motif 167..198 CDD:320059 5/16 (31%)
clpr-4NP_492903.2 CysPc <40..242 CDD:469591 21/116 (18%)

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