DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pef and clp-7

DIOPT Version :10

Sequence 1:NP_610592.1 Gene:Pef / 36111 FlyBaseID:FBgn0033529 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_500082.2 Gene:clp-7 / 176953 WormBaseID:WBGene00000547 Length:778 Species:Caenorhabditis elegans


Alignment Length:128 Identity:27/128 - (21%)
Similarity:47/128 - (36%) Gaps:32/128 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VDRDRSGKINASELQAALVNG--RGDHFSDNACKLMISMFDNDASGTIDIYEFEKLYNYINQWLQ 104
            :|.|.:.|      :|.|.||  ||..:|..|.:.:     |...|.:.:......:....:|..
 Worm   503 IDADENVK------EAQLTNGLVRGHAYSITAIQTV-----NTYGGQVPLLRIRNPWGNSKEWNG 556

  Fly   105 VFKTYDQDSSGHIEEQEL-TQAFTQMGFRFSPEFINFLVKKSDPQGHKEVSVDQFIVLCVQVQ 166
            .:      |.|..|..:: .|...|||.:|:.:            |...:|.|.|:....|::
 Worm   557 AW------SDGSSEWSQVDPQQREQMGVQFAKD------------GEFWMSFDDFMTNFTQME 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PefNP_610592.1 EFh_PEF_peflin 34..198 CDD:320059 27/128 (21%)
EF-hand motif 34..63 CDD:320059 7/22 (32%)
EF-hand motif 71..100 CDD:320059 3/28 (11%)
EF-hand motif 101..131 CDD:320059 7/30 (23%)
EF-hand motif 137..166 CDD:320059 5/28 (18%)
EF-hand motif 167..198 CDD:320059 27/128 (21%)
clp-7NP_500082.2 Peptidase_C2 311..604 CDD:459889 27/128 (21%)
Calpain_III 627..777 CDD:238132
Blue background indicates that the domain is not in the aligned region.

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