DRSC/TRiP Functional Genomics Resources

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Protein Alignment trsn and AT2G03780

DIOPT Version :10

Sequence 1:NP_610591.1 Gene:trsn / 36110 FlyBaseID:FBgn0033528 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_178473.2 Gene:AT2G03780 / 814905 AraportID:AT2G03780 Length:287 Species:Arabidopsis thaliana


Alignment Length:224 Identity:57/224 - (25%)
Similarity:98/224 - (43%) Gaps:23/224 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVELCAQK 72
            |.||.|..|::|..|.||.:..|.|:|...||:...::..:..|..:  .....|.|.:|  |.:
plant    52 DAFSTYADYLNNFNEKRERVVKVSRDITMNSKKVIFQVHRLSKDNKE--EVLEKAGKDLE--AVR 112

  Fly    73 YQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEA---------GFLVTRETV-AEMLGLK 127
            .|..|.|:   :..:.:|.|..   |..:...:..|:||         |.|.|.:.: ..::.|.
plant   113 DQHFARLM---KELQGTDFWKL---RRAYSPGVQEYVEAATFYKFCLSGTLCTLDEINTTLVPLS 171

  Fly   128 ISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKND-- 190
            ....|...:::.||:||:..|..||.|.|...::.|:.|....|..|:..::....|:..|.|  
plant   172 DPSLEPLQINILDYILGLADLTGELMRMAIGRISDGEIEFAQRICQFVRQIHRELMLVVPKMDDS 236

  Fly   191 -GLRKRFDALKYDVKKIEEVVYDVSIRGL 218
             .::.:.:.:...|.|||...:.|.:|||
plant   237 YDMKSKMEVMLQSVIKIENACFSVHVRGL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trsnNP_610591.1 Translin 13..217 CDD:271349 51/216 (24%)
AT2G03780NP_178473.2 Translin 66..264 CDD:460410 48/207 (23%)

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