DRSC/TRiP Functional Genomics Resources

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Protein Alignment trsn and TSNAX

DIOPT Version :10

Sequence 1:NP_610591.1 Gene:trsn / 36110 FlyBaseID:FBgn0033528 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_005990.1 Gene:TSNAX / 7257 HGNCID:12380 Length:290 Species:Homo sapiens


Alignment Length:234 Identity:54/234 - (23%)
Similarity:100/234 - (42%) Gaps:34/234 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHS--DLSQISAACGLARKQVEL--CA 70
            |.::|:.:|...:..|.:..:.|:|...||.....|..|.|  |:..|     |...:::|  ..
Human    39 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI-----LTESEIKLDGVR 98

  Fly    71 QKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLKISQSEG-- 133
            ||..::|:.:.....:::....|...|..:..::...:::...|::.:.:.:.| :..::..|  
Human    99 QKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQL-IFTTEDNGKE 162

  Fly   134 ---------------FHLDVE--DYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTG 181
                           :.|.|.  |||||:..|..||.|...|||..||.:.|..:|.|:..:..|
Human   163 NKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDG 227

  Fly   182 FRLLNLKNDG---LRKRFDALKYDVKKIEEVVYDVSIRG 217
            |..:.  |.|   :.|:...||..:.|:|...|.:.:||
Human   228 FSFIG--NTGPYEVSKKLYTLKQSLAKVENACYALKVRG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trsnNP_610591.1 Translin 13..217 CDD:271349 51/229 (22%)
TSNAXNP_005990.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
Translin-like 42..256 CDD:271348 50/221 (23%)
Interaction with C1D. /evidence=ECO:0000269|PubMed:11801738 73..208 29/140 (21%)
Blue background indicates that the domain is not in the aligned region.

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