DRSC/TRiP Functional Genomics Resources

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Protein Alignment trsn and Tsnax

DIOPT Version :10

Sequence 1:NP_610591.1 Gene:trsn / 36110 FlyBaseID:FBgn0033528 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_058605.1 Gene:Tsnax / 53424 MGIID:1855672 Length:290 Species:Mus musculus


Alignment Length:231 Identity:54/231 - (23%)
Similarity:98/231 - (42%) Gaps:28/231 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHS--DLSQISAACGLARKQVELCAQK 72
            |.::|:.:|...:..|.:..:.|:|...||.....|..|.|  |:.:|...   :..:::...||
Mouse    39 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTE---SESKLDGVRQK 100

  Fly    73 YQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGL---------KI 128
            ..::|:.:.....:::....|...|..:..::...:::...|::.|.:.:.|..         |.
Mouse   101 ILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQLTFTAEDSGKESKT 165

  Fly   129 SQSEG---------FHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRL 184
            ..:||         ..|...|||||:..|..||.|...|||..||.:.|..:|.|:..:..||..
Mouse   166 PPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSF 230

  Fly   185 LNLKNDG---LRKRFDALKYDVKKIEEVVYDVSIRG 217
            :.  |.|   :.|:...||..:.|:|...|.:.:||
Mouse   231 IG--NTGPYEVSKKLYTLKQSLAKVENACYALKVRG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trsnNP_610591.1 Translin 13..217 CDD:271349 51/226 (23%)
TsnaxNP_058605.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Translin-like 42..256 CDD:470011 50/218 (23%)
Interaction with C1D. /evidence=ECO:0000250 73..208 29/137 (21%)
Blue background indicates that the domain is not in the aligned region.

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