DRSC/TRiP Functional Genomics Resources

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Protein Alignment trsn and tsn

DIOPT Version :10

Sequence 1:NP_610591.1 Gene:trsn / 36110 FlyBaseID:FBgn0033528 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001007517.1 Gene:tsn / 493243 XenbaseID:XB-GENE-970319 Length:228 Species:Xenopus tropicalis


Alignment Length:229 Identity:119/229 - (51%)
Similarity:154/229 - (67%) Gaps:9/229 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LDIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSD--LSQISAACGLARKQVELC 69
            :|:|...|..:..:|:|||.||.||:.:|..::|..|.||.:|.:  ...|.|.|.|||:.....
 Frog     4 IDMFVQLQNGLSADQDVREEIRKVVQSLEQTAREILILLQGVHQEAGFKDIPAKCLLAREHYGTV 68

  Fly    70 AQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLKISQSEGF 134
            ..:...|....|..|||::.|.|.|:.|||:|:.:.::|||:..|||||..||:||:...:.:||
 Frog    69 RAQLAALQTKFPTEQYYKFHDQWRFVLQRLVFLASFLVYLESETLVTREAAAEILGIAYEREKGF 133

  Fly   135 HLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDAL 199
            |||:||||.|:|.||:||||.|.|||..|||.|||.|:.||.:|:.||||||||||.||||:|.|
 Frog   134 HLDIEDYLSGVLNLANELSRLAVNSVIAGDYSRPLRIASFINELDFGFRLLNLKNDSLRKRYDGL 198

  Fly   200 KYDVKKIEEVVYDVSIRGLSSKEKDQQEEPAVPA 233
            |||||||||||||:||||||      :|||| ||
 Frog   199 KYDVKKIEEVVYDLSIRGLS------KEEPA-PA 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trsnNP_610591.1 Translin 13..217 CDD:271349 107/205 (52%)
tsnNP_001007517.1 Translin 10..216 CDD:271349 107/205 (52%)

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