DRSC/TRiP Functional Genomics Resources

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Protein Alignment trsn and tsnax

DIOPT Version :10

Sequence 1:NP_610591.1 Gene:trsn / 36110 FlyBaseID:FBgn0033528 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001006778.1 Gene:tsnax / 448467 XenbaseID:XB-GENE-947707 Length:297 Species:Xenopus tropicalis


Alignment Length:239 Identity:57/239 - (23%)
Similarity:102/239 - (42%) Gaps:36/239 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVELCA--QK 72
            |..:|..:|...:..|.:..:.|:|...||..   :.::|..:|..:....|:..:.:|.|  ||
 Frog    39 FKAFQHDLDARHDKYERLVKLGRDITIESKRT---IFLLHRMISDHNKEDVLSEAETKLLAVRQK 100

  Fly    73 YQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEML------GLKISQS 131
            .:::||.:.....|:|...:|...|..:..|....::|:..|||...:.:.|      .:.:..:
 Frog   101 IKEIAEELVGEDMYQYHRAFTPGLQEYVEAITFKHFIESRTLVTINEINKQLIFEDLENMPMITT 165

  Fly   132 EGF-----------HLDVE---------DYLLGILQLASELSRFATNSVTMGDYERPLNISHFIG 176
            |.|           |..:.         |||||:..|..||.|:..:||..||.:.|..:|.|:.
 Frog   166 ESFCGNLSSSPDNRHSKISALSIQVTPVDYLLGVADLTGELMRYCISSVGNGDIDTPFELSCFLR 230

  Fly   177 DLNTGFRLLNLKNDG---LRKRFDALKYDVKKIEEVVYDVSIRG 217
            .:..||..:.  |.|   :.::...||..:.|:|...|.:.:||
 Frog   231 QVFDGFSYIG--NTGPYEISRKIHVLKQSLSKVENACYALKVRG 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trsnNP_610591.1 Translin 13..217 CDD:271349 54/234 (23%)
tsnaxNP_001006778.1 Translin 51..272 CDD:460410 52/225 (23%)

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