DRSC/TRiP Functional Genomics Resources

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Protein Alignment trsn and tsn

DIOPT Version :9

Sequence 1:NP_610591.1 Gene:trsn / 36110 FlyBaseID:FBgn0033528 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001020623.1 Gene:tsn / 334107 ZFINID:ZDB-GENE-030131-6039 Length:227 Species:Danio rerio


Alignment Length:223 Identity:118/223 - (52%)
Similarity:157/223 - (70%) Gaps:3/223 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIH--SDLSQISAACGLARKQVELCA 70
            ::||..|.::..:|::||:||.||:.:|..::|....||.:|  :....|.:.|..||:......
Zfish     5 EMFSYIQGFLSADQDIREDIRKVVQGLEQTAREILTVLQSVHQPTGFKDIPSKCLKARELFCTVR 69

  Fly    71 QKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLKISQSEGFH 135
            ....:|....|..|||||.:.|.|:.|||.|:.|.|:|||:..|||||.||::|.:::.:.:|||
Zfish    70 NHTGELKTKFPVEQYYRYHELWRFVLQRLAFLAAFVVYLESEALVTREEVAKILAIEVDREKGFH 134

  Fly   136 LDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDALK 200
            |||||||.|:|.|||||||.|.||||.|||.|||.||:||.:|::||||||||||.||||:|.||
Zfish   135 LDVEDYLAGVLILASELSRLAVNSVTAGDYGRPLRISNFINELDSGFRLLNLKNDPLRKRYDGLK 199

  Fly   201 YDVKKIEEVVYDVSIRGLSSKEKDQQEE 228
            ||||||||||||:||||| :||::..||
Zfish   200 YDVKKIEEVVYDLSIRGL-AKEQEAGEE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trsnNP_610591.1 Translin 13..217 CDD:271349 109/205 (53%)
tsnNP_001020623.1 Translin 10..216 CDD:271349 109/205 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574318
Domainoid 1 1.000 208 1.000 Domainoid score I2814
eggNOG 1 0.900 - - E1_KOG3067
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3397
Inparanoid 1 1.050 222 1.000 Inparanoid score I3513
OMA 1 1.010 - - QHG55801
OrthoDB 1 1.010 - - D1187354at2759
OrthoFinder 1 1.000 - - FOG0006024
OrthoInspector 1 1.000 - - oto40803
orthoMCL 1 0.900 - - OOG6_104779
Panther 1 1.100 - - LDO PTHR10741
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1560
SonicParanoid 1 1.000 - - X4320
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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