DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and CAT2

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_013670.1 Gene:CAT2 / 854965 SGDID:S000004506 Length:670 Species:Saccharomyces cerevisiae


Alignment Length:654 Identity:183/654 - (27%)
Similarity:307/654 - (46%) Gaps:73/654 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 W-NKPGLY------SFQG-------SLPRLPLPSVKDTMTRYLRSVRPLLDD-ENYTRMERLAKE 208
            | .||..:      :|||       .||.||:|.:|.|:.:||:::||..:| |.:.|.:.|.|:
Yeast    48 WAEKPNKFYQNKRPNFQGITFAKQQDLPSLPVPELKSTLDKYLQTIRPFCNDVETFERQQLLCKD 112

  Fly   209 FEQTIGKKLQWYLILKSWWSTNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMN----LTDKQA 269
            |.:.:|..||..|...:....|:::.:|:|..||:...|:....:::.:.....|    :.:...
Yeast   113 FSEHMGPILQDRLKEYANDKRNWMAKFWDEQSYLQYNDPIVPYVSYFYSHMPLPNHLSKIDNDPL 177

  Fly   270 ARAANVISLLLNFRRLIEHQELQPIMVQGMIPLCSWQYERTFNTARVPGL---ETDRIIHYR--D 329
            .:|..:||.::.|...|:.:.|...:::|| |.|...:...|||:|:||.   ..|..|.|.  :
Yeast   178 IKATAIISTVVKFIEAIKDESLPVEIIKGM-PFCMNSFSLMFNTSRLPGKPEDNQDTNIFYSVYE 241

  Fly   330 SNHIVVLHKGCYYKMLIY-YKGRILRPCELQVQIEEIL--KGKATPVEGEEHLAALTAWNRSKWA 391
            :|.:.:.:||.:||::.: ...:.|...|:..|:..::  ..::.|..|  .:.:||:..|.:|.
Yeast   242 NNFVTIAYKGKFYKLMTHDGNDKPLSENEIWRQLYSVVFQGSQSDPKLG--GIGSLTSLPRDQWR 304

  Fly   392 EARNTFFSWGVNQTSLRTIESAAFVLSLD-DEPFEFDLARPELLDNFGKKLLHGNGYNRWFDKCF 455
            |.........::|.||.||..::|:|.|| |:       .|..|:...:...||:|.||::||..
Yeast   305 EVHLELMKDPISQDSLETIHKSSFMLCLDLDQ-------SPVTLEEKSRNCWHGDGINRFYDKSL 362

  Fly   456 TVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDL----VSDGYDETGNTKGTPAFQPPTPTRL 516
            ...|..||..||.|||:..|......: .|.:...|    |.|...:......|.|.:   |..|
Yeast   363 QFLVTGNGSSGFLAEHSKMDGTPTLFL-NNYVCQQLNKLDVDDFMRKVITPSSTVAMK---PMEL 423

  Fly   517 TWDLKPCLAQ-IEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAG 580
            .:.:.|.:.: ||.|.:...:.|.|.:||:..:..|||.|:|:..:||||:||..:|||.::...
Yeast   424 PFIITPKIHKAIESAQLQFKETIGEHDLRVWHYNKYGKTFIKRHGMSPDAFIQQVIQLAVFKYLK 488

  Fly   581 RFSLTYEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAM 645
            |...||||:.||.:.:|||||.|..:..|..:|...||.:....|:::.::.:...|....::|.
Yeast   489 RQLPTYEAASTRKYFKGRTETGRSVSTASLEFVSKWQNGDVPIAEKIQALKHSAKEHSTYLKNAA 553

  Fly   646 CGRGIDRHLFCLYVVSKYLE------VDSPFLNEVLSEPWRLSTSQTPHGQTPKMDLKKHPNCIS 704
            .|.|:|||.|.|..:.|..:      ...|..|  .|..|.:||||.   .:...|         
Yeast   554 NGNGVDRHFFGLKNMLKSNDDQIPPLFKDPLFN--YSSTWLISTSQL---SSEYFD--------- 604

  Fly   705 AGGGFGPVADDGYGVSYIIAGENLIFFHISA--KTTCQQTDVHRFAQNISQALSDIRSMFEQHMK 767
             |.|:..|.|:|:|::|::..|   :.||:.  |.......|:|....:|||..:|....|...|
Yeast   605 -GYGWSQVNDNGFGLAYMLNNE---WLHINIVNKPAKSGASVNRLHYYLSQAADEIFDALENENK 665

  Fly   768 DHPK 771
            ...|
Yeast   666 RKAK 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 173/614 (28%)
CAT2NP_013670.1 Carn_acyltransf 74..657 CDD:395612 173/614 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46717
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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