DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and YAT1

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_009420.1 Gene:YAT1 / 851285 SGDID:S000000080 Length:687 Species:Saccharomyces cerevisiae


Alignment Length:708 Identity:184/708 - (25%)
Similarity:292/708 - (41%) Gaps:139/708 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 SLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFE-----QTIGKKLQWY--LILKSWW 227
            :|.|||:|.::||:.|||..|.||.|:....|..|.....|     .|:.::|..|  .:.:|..
Yeast     3 NLKRLPIPPLQDTLNRYLARVEPLQDERQNRRTRRTVLSAENLDALNTLHERLLEYDARLAESNP 67

  Fly   228 STNYVSD-WWEEYVYLRGRSPLCVNSNF-------------------YGTDAIFMNLTDKQAARA 272
            .::|:.. |::.|:.......|.||..|                   ||...:       |..||
Yeast    68 ESSYIEQFWYDAYLLYDATVVLNVNPYFQLQDDPTIKDTPETAAQGPYGAHTV-------QVRRA 125

  Fly   273 ANVISLLLNFRRLIEHQELQPIMVQGMIPLCSWQYERTFNTARVP--------GLETDRIIHYRD 329
            |.:.:.:|.|.|.|.|..|:...|:|..||...||||.|.::|:|        .|:||...|   
Yeast   126 ARLTTSILKFIRQIRHGTLRTDTVRGKTPLSMDQYERLFGSSRIPPGPGEPSCHLQTDATSH--- 187

  Fly   330 SNHIVVLHKGCYYKMLIY---YKGRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWA 391
              |:|.:::|.:|...:.   .:.....|.:|:..:..|:....:...|.......|..:|..|:
Yeast   188 --HVVAMYRGQFYWFDVLDTRNEPIFATPEQLEWNLYSIIMDAESAGSGSAPFGVFTTESRRVWS 250

  Fly   392 EARNTFFSWG--VNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGNG-------- 446
            ..|:..|...  .|..:|:.|:||.||:.|||..|..|..     |...:.:|.|..        
Yeast   251 NIRDYLFHADDCTNWRNLKLIDSALFVVCLDDVAFAADQQ-----DELTRSMLCGTSTINLDPHQ 310

  Fly   447 ------------YNRWFDKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDLVSDGYDET 499
                        .|||:|| ..:.|..||:.|.|.|||..|......:..::..|.::|.....|
Yeast   311 HQPPLNVQTGTCLNRWYDK-LQLIVTKNGKAGINFEHTGVDGHTVLRLATDIYTDSILSFARGVT 374

  Fly   500 GNT-------KGTPAFQP-----------PTPTRLTWDLKPCL-AQIEEATIDVTKLINEVNLRI 545
            .|.       .|.|:...           ..|.:|.|.....| :.:..|...::.||::.....
Yeast   375 KNVVDIFSDDDGKPSSSSLASAAHSANLITIPRKLEWRTDNFLQSSLHFAETRISDLISQYEFVN 439

  Fly   546 LVHQDYGKGFMK---KCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREGRTETVRPCTI 607
            |...:||...:|   ||  ||||::|...|:||:...|||...||.:||:.|:.||||.:|..|.
Yeast   440 LDFSNYGASHIKTVFKC--SPDAFVQQVFQVAYFALYGRFETVYEPAMTKAFQNGRTEAIRSVTG 502

  Fly   608 ESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLYVVSKYLEVDSPFLN 672
            :|..:||::.:.:.::..:::::..||..|....::...|.|.||||:.||.:......|...|.
Yeast   503 QSKLFVKSLLDQDASDATKIQLLHDACTAHSQITRECSQGLGQDRHLYALYCLWNQWYKDKLELP 567

  Fly   673 EVL-SEPWR------LSTSQTPHGQTPKMDLKKHPNCISAGG------GFGPVADDGYGVSYIIA 724
            .:. .:.|.      ||||                ||   |.      |||||..:|:|:.|||.
Yeast   568 PIFRDKSWTTMQNNVLSTS----------------NC---GNPCLKSFGFGPVTANGFGIGYIIR 613

  Fly   725 GENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQHMKDHPKPAKSLTNGKST 782
            ..:     :|...:.:.....|||..:.::|.:|..:|::......|||...|...:|
Yeast   614 DHS-----VSVVVSSRHRQTARFASLMEKSLLEIDRIFKRQQARAAKPAARTTASANT 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 177/682 (26%)
YAT1NP_009420.1 Carn_acyltransf 4..642 CDD:395612 177/681 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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