DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and Crot

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_038964380.1 Gene:Crot / 83842 RGDID:70908 Length:752 Species:Rattus norvegicus


Alignment Length:634 Identity:188/634 - (29%)
Similarity:306/634 - (48%) Gaps:67/634 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 YSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWST 229
            :.:|.|||.||:||:::::.:||.||:|..:::.|.:.|.:.::|:..:||.|...|:.::....
  Rat   154 FQYQDSLPPLPVPSLEESLKKYLESVKPFANEDEYKKTEEIVQKFQDGVGKTLHQKLLERAKGKR 218

  Fly   230 NYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNL----TDKQAARAANVISLLLNFRRLIEHQE 290
            |::.:||....||..|.|..:|.||.|....|.:.    ...|..|.:.::...||:.:|:..::
  Rat   219 NWLEEWWLNVAYLDVRIPSQLNVNFVGPSPHFEHYWPAREGTQLERGSILLWHNLNYWQLLRREK 283

  Fly   291 LQPIMVQGMIPLCSWQYERTFNTARVPGLETDRIIHYRDS-------NHIVVLHKGCYYKMLIYY 348
            | |:...|..||...|:...|:|.:|||:..|.|::|..:       .||.||.:|..:...:.:
  Rat   284 L-PVHKSGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVLH 347

  Fly   349 KGRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWGV---NQTSLRTI 410
            .|.::.|.||..|:..|.:.......|.. :||||:..|::||:||.  :..|:   |.|.|..|
  Rat   348 DGCLITPPELLRQLTYIYQKCWNEPVGPS-IAALTSEERTRWAKARE--YLIGLDPENLTLLEKI 409

  Fly   411 ESAAFVLSLDD-EPFEFDLARPELLDNFGKKLLHGNGYNRWFDKCFTVCVGTNGRVGFNAEHTWS 474
            :|:.||.|::| .|.    |.||......:.||.|:...||.||.:.:....||..|.:.:|...
  Rat   410 QSSLFVYSIEDTSPH----ATPENFSQVFEMLLGGDPAVRWGDKSYNLISFANGIFGCSCDHAPY 470

  Fly   475 DAA----IASHMWENLIVDDLVSDGYDETGNTKGTPAFQP-PTPTRLTWDL-KPCLAQIEEATID 533
            ||.    ||.::.|.|:         :..|..||:...:. |.|..|.:.: :..|..:.:|...
  Rat   471 DAMVMVNIAHYVDEKLL---------ETEGRWKGSEKVRDIPLPEELAFTVDEKILNDVYQAKAQ 526

  Fly   534 VTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREGR 598
            ..|..:::.:.......:||...||..:.||.:||:||||||||..||....||.:|||.|..||
  Rat   527 HLKAASDLQIAASTFTSFGKKLTKKEALHPDTFIQLALQLAYYRLHGRPGCCYETAMTRYFYHGR 591

  Fly   599 TETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLYVVSKY 663
            |||||.||:|:..|.::||:|:.:..||.:.|..|..:|....:|...|:|.||||..|.:::|.
  Rat   592 TETVRSCTVEAVRWCQSMQDPSASLLERQQKMLDAFAKHNKMMRDCSHGKGFDRHLLGLLLIAKE 656

  Fly   664 LEVDSPFLNEVLSEP----------WRLSTSQTPHGQTPKMDLKKHPNCISAGGGFGPVADDGYG 718
            ..:..|   |:..:|          :.||||...:              :...|...|:..:|||
  Rat   657 EGLPVP---ELFEDPLFSRSGGGGNFVLSTSLVGY--------------LRIQGVVVPMVHNGYG 704

  Fly   719 VSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSD-IRSMFEQHM 766
            ..|.|..:..: ...|:..:|.:||..:..:.|..|..| |..|...|:
  Rat   705 FFYHIRDDRFV-VTCSSWRSCLETDAEKLVEMIFHAFHDMIHLMNTAHL 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 183/619 (30%)
CrotXP_038964380.1 Carn_acyltransf 160..743 CDD:395612 182/617 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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