DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment whd and Cpt1c

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001344599.1 Gene:Cpt1c / 78070 MGIID:2446526 Length:799 Species:Mus musculus


Alignment Length:782 Identity:329/782 - (42%)
Similarity:466/782 - (59%) Gaps:29/782 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEAHAAVAFSFAITHEGFDINYDHEVLNLVWNSGVRSWKKRLARARNGVRNGVYPA-HIQSLWL 64
            |||||.|.:...:::.:|.::.....|...::...:||||:.|.|..|....||.|| .:..|:|
Mouse     1 MAEAHQASSLLSSLSSDGAEVELSSPVWQEIYLCALRSWKRHLWRVWNDFLAGVVPATPLSWLFL 65

  Fly    65 ISAIALGLHFAGYQAPFNLTNRILVHLPSNTINW-----QVTACFLAALV----VWLSICFTMRY 120
            .|.|.|.. .........|..:|...||    :|     |:.. ||:|.|    :|.::.||:..
Mouse    66 FSTIQLAC-LLQLDPSLGLMEKIKELLP----DWGGQHHQLQG-FLSAAVFASCLWGALIFTLHV 124

  Fly   121 TLKLLLMYKGWMYESRAPGSRVSLPTMLWVAVVRVLSSWNKPGLYSFQGSLPRLPLPSVKDTMTR 185
            .|:|||.:.||:.|   |...:|.||..|:|:||:.|. ..|.|:|||.:|||.|:||.::|:.:
Mouse   125 ALRLLLSHHGWLLE---PHGAMSSPTKTWLALVRIFSG-RHPRLFSFQRALPRQPVPSAQETVRK 185

  Fly   186 YLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWSTNYVSDWWEEYVYLRGRSPLCV 250
            ||.||||:|.|:.:.|...||.:|.:....:||.||.||||.::|||||||||:||||.|..| :
Mouse   186 YLESVRPVLGDDAFDRATALANDFLRLHAPRLQLYLQLKSWCTSNYVSDWWEEFVYLRSRGSL-I 249

  Fly   251 NSNFY-GTDAIFMNLTDKQAARAANVISLLLNFRRLIEHQELQPIMVQGMIPLCSWQYERTFNTA 314
            ||.:| ..|.:::..|..|||||.|.:..||.:|.|:..||:.|.::.||.||||.||||.|||.
Mouse   250 NSTYYMMQDFLYVTPTPLQAARAGNAVHTLLLYRHLLNRQEISPTLLMGMRPLCSAQYERMFNTT 314

  Fly   315 RVPGLETDRIIHYRDSNHIVVLHKGCYYKMLIYYKGRILRPCELQVQIEEILKGKATPVEGEEHL 379
            |:||:|.|.:.|.:||.|:.|.|:|.::::..:....:|.|..|:.|.::||...:.....||||
Mouse   315 RIPGVEKDHLRHLQDSRHVAVFHRGRFFRVGTHSPNGLLSPRALEQQFQDILDDPSPACPLEEHL 379

  Fly   380 AALTAWNRSKWAEARNTFFSWGVNQTSLRTIESAAFVLSLDDEPFEFDLARPEL-LDNFGKKLLH 443
            |||||..||.||:.|.:..:...  |:|..:|.|||.:|||.||.......|.. ||.:...||.
Mouse   380 AALTAAPRSMWAQVRESVKTHAA--TALEAVEGAAFFVSLDSEPAGLTREDPAASLDAYAHALLA 442

  Fly   444 GNGYNRWFDKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDLVSDGYDETGNTKGTPAF 508
            |.|::|||||.||:.|.:||::|.:.||:|:|..::.|:||..:..:....||...|:.||.|..
Mouse   443 GRGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCPVSGHLWEFTLATECFQLGYATDGHCKGHPDP 507

  Fly   509 QPPTPTRLTWDL-KPCLAQIEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQ 572
            ..|.|.||.||| :.....|..|......|...::..:.....:||.|:|.|.:|.|::||:.||
Mouse   508 TLPQPQRLQWDLPEQIQPSISLALRGAKTLSGNIDCHVFPFSHFGKSFIKCCHVSSDSFIQLVLQ 572

  Fly   573 LAYYRDAGRFSLTYEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRH 637
            ||::||.|:|.||||::|||||.||||||||.||.|:..:|:||.| ..|:...:.:.:.|.|:|
Mouse   573 LAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACQFVRAMDN-KETDQHCLALFRVAVDKH 636

  Fly   638 QLGYQDAMCGRGIDRHLFCLYVVSKYLEVDSPFLNEVLSEPWRLSTSQTPHGQTPKMDLKKHPNC 702
            |...:.||.|:|||||||.||::|:.|.:.||||.:|.|:.|.|||||.|..||..:|:..:|:.
Mouse   637 QALLKAAMSGQGIDRHLFALYIMSRLLHMQSPFLTQVQSQQWLLSTSQVPVQQTHLIDVHNYPDY 701

  Fly   703 ISAGGGFGPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFE--QH 765
            :|:||||||..|.|||:|||..|||.|.||||:|.:..:||.||..|:|..||.|:.|:|.  ||
Mouse   702 VSSGGGFGPAHDHGYGISYIFMGENAITFHISSKKSSTETDSHRLGQHIENALLDVASLFRVGQH 766

  Fly   766 MK 767
            .|
Mouse   767 FK 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093 13/43 (30%)
Carn_acyltransf 171..759 CDD:279140 266/590 (45%)
Cpt1cNP_001344599.1 CPT_N 1..46 CDD:318644 13/44 (30%)
Carn_acyltransf 171..754 CDD:307070 263/586 (45%)
Coenzyme A binding. /evidence=ECO:0000250 552..564 6/11 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837728
Domainoid 1 1.000 668 1.000 Domainoid score I151
eggNOG 1 0.900 - - E1_KOG3716
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 785 1.000 Inparanoid score I520
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56619
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 1 1.000 - - FOG0002000
OrthoInspector 1 1.000 - - otm43877
orthoMCL 1 0.900 - - OOG6_102071
Panther 1 1.100 - - O PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X480
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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