DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and crot

DIOPT Version :10

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001018161.1 Gene:crot / 553204 ZFINID:ZDB-GENE-050522-35 Length:612 Species:Danio rerio


Alignment Length:632 Identity:194/632 - (30%)
Similarity:307/632 - (48%) Gaps:68/632 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 YSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWST 229
            :.:|.|||.||:|:::||:::||.:|:|...:|.:.....:.|.||:.||::|...|:.::....
Zfish    14 FQYQRSLPPLPVPALRDTLSKYLDAVKPFASEEEFGATVAIVKRFEEGIGQELHQKLLQRAKSKR 78

  Fly   230 NYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNL----TDKQAARAANVISLLLNFRRLIEHQE 290
            |::.:||.:..||..|.|..:|.||.|..|...:.    ...|..|.:.|:.|......||..:.
Zfish    79 NWLEEWWLDTAYLEVRIPSQLNVNFGGPTAYLEHCWPPQEGTQLERTSMVLWLTFQCWDLIRTER 143

  Fly   291 LQPIMVQGMIPLCSWQYERTFNTARVPGLETDRIIHYRDS-------NHIVVLHKGCYYKMLIYY 348
            | .|...|.||....|:...|.|.:|||:..|.|:::..:       :|::|:.:|..:......
Zfish   144 L-AIHKAGTIPFDMDQFRMLFCTCKVPGITKDTILNFFKTESEGPCPSHVIVMCRGRIFTFDALC 207

  Fly   349 KGRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWG-VNQTSLRTIES 412
            .||||.|.||..|:..|........|| :.::|||...|::||:||....|.. ||:|.|.||:|
Zfish   208 DGRILTPPELLRQLTYIKNCCDGEPEG-DGVSALTTEERTRWAKAREYLISMDPVNKTILETIQS 271

  Fly   413 AAFVLSLDD-EPFEFDLARPELLDNFGKKLLHGNGYNRWFDKCFTVCVGTNGRVGFNAEHTWSDA 476
            |.||:.||| :|:    |.|:.........|.|:..|||.||.:.:...:||....|.:|...||
Zfish   272 ALFVVGLDDAKPY----ATPDNYTQLTDLALTGDPTNRWGDKSYNLVCYSNGIFSSNCDHAPYDA 332

  Fly   477 AIASHMWENLIVDDLVSDGY--DET-----GNTKGTPAF-QPPTPTRLTWDLKPCLAQ-IEEATI 532
            .:            |||:||  |:.     |..||.... |.|.|..|.:.:...:.: |..|..
Zfish   333 MV------------LVSNGYYVDQKLKACGGVWKGLEVVRQMPVPEELIFTVDERVRRDIALAKE 385

  Fly   533 DVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREG 597
            ..:|...::.:.......:||..:||.::.||.::|:||||||||..|:....||.:.||.|..|
Zfish   386 QYSKSCQDLQVVSYAFTSFGKTAIKKRKLHPDTFVQLALQLAYYRQHGQPGCCYETATTRRFFHG 450

  Fly   598 RTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLYVVSK 662
            ||||:||||:|:..|.:.|.||..|.:|:...:.||.::|.....:|..|:||||||..||:::|
Zfish   451 RTETMRPCTMEAQHWCRTMMNPAATTEEKRHTLHAAVNKHNKLMAEAQDGKGIDRHLLGLYLIAK 515

  Fly   663 YLEVDSPFLNEVLSEP----------WRLSTSQTPHGQTPKMDLKKHPNCISAGGGFGPVADDGY 717
            ...:..|   |:.::|          :.||||..  |.|..:            |...|:...||
Zfish   516 ENSIPVP---ELYADPLYTKSGGGGNFVLSTSLV--GYTTVL------------GAVAPMVPHGY 563

  Fly   718 GVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQ 764
            |..|.|..:.::....:.|:. .:||.....||::.:|.::..:..|
Zfish   564 GFFYRIRDDRIVASCTAWKSN-PETDAETLFQNLATSLHEMMHITTQ 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..753 CDD:459926 188/610 (31%)
crotNP_001018161.1 Carn_acyltransf 23..596 CDD:459926 187/608 (31%)
Blue background indicates that the domain is not in the aligned region.

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