DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and cpt1b

DIOPT Version :10

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001315121.1 Gene:cpt1b / 449677 ZFINID:ZDB-GENE-041010-9 Length:770 Species:Danio rerio


Alignment Length:773 Identity:399/773 - (51%)
Similarity:523/773 - (67%) Gaps:11/773 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEAHAAVAFSFAITHEGFDINYDHEVLNLVWNSGVRSWKKRLARARNGVRNGVYPAHIQSLWLI 65
            |||||.||||.|.:|.:|.|:....|||..::.|||.|||||..|.:|.|..|||||. .|.||.
Zfish     1 MAEAHQAVAFQFTVTPDGIDLQLSREVLKHIYISGVTSWKKRAIRFKNSVLTGVYPAS-PSSWLF 64

  Fly    66 SAIA-LGLHFAGYQAPFNLTNRILVHLPSN---TINWQ-VTACFLAALVVWLSICFTMRYTLKLL 125
            ..|| :...:|.........::|...||.:   |:..| |.:..|.|..:|||:.|.:||.||.|
Zfish    65 VVIAIMSTMYARIDPSMGTIDKIKTSLPVSEFMTVQTQTVLSAILFATGLWLSVIFLLRYLLKAL 129

  Fly   126 LMYKGWMYESRAPGSRVSLPTMLWVAVVRVLSSWNKPGLYSFQGSLPRLPLPSVKDTMTRYLRSV 190
            |.|..|::||.   .::|..|.:|:::|::||. .:|.|||||||||.||:||:.||:.|||.||
Zfish   130 LSYHAWIFESH---GKMSYSTKVWLSLVKLLSG-RRPLLYSFQGSLPHLPVPSIDDTIRRYLESV 190

  Fly   191 RPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWSTNYVSDWWEEYVYLRGRSPLCVNSNFY 255
            |||||||.|.:||.:|.:|::....|||.:|.|||||:|||||||||||:|||||.|:.||||||
Zfish   191 RPLLDDEQYKQMETVANDFKKDPAPKLQKHLKLKSWWATNYVSDWWEEYIYLRGRDPIMVNSNFY 255

  Fly   256 GTDAIFMNLTDKQAARAANVISLLLNFRRLIEHQELQPIMVQGMIPLCSWQYERTFNTARVPGLE 320
            ..|.:::..|.:|||||.||:..:|.:||.:|..||.|:...|::|:||:||||.|||.|:||:|
Zfish   256 TMDLLYVIPTYRQAARAGNVVHAMLQYRRKLERGELTPLRALGIVPMCSFQYERMFNTTRIPGIE 320

  Fly   321 TDRIIHYRDSNHIVVLHKGCYYKMLIYYKGRILRPCELQVQIEEILKGKATPVEGEEHLAALTAW 385
            ||.:.|.:|..|:||.|:|..:|:.:||.||.|.|.||::|.:.||..|:.|..||..|.:|||.
Zfish   321 TDFVQHLKDRKHLVVYHRGRLFKVWLYYGGRHLWPSELELQFQRILDDKSEPQPGELKLPSLTAG 385

  Fly   386 NRSKWAEARNTFFSWGVNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGNGYNRW 450
            ||..||.||..:|..|||:.||..||:|||.|:||||...:|......||.:.|.||||..|:||
Zfish   386 NRVPWARARLKYFGEGVNRASLEAIETAAFFLTLDDEAHGYDPENIRSLDLYAKSLLHGKCYDRW 450

  Fly   451 FDKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDLVSDGYDETGNTKGTPAFQPPTPTR 515
            |||.|.:.|..||::|.|.||:|:|:.|..||||.::..|....||...|:.||........|||
Zfish   451 FDKSFNLIVYKNGKMGVNTEHSWADSPIIGHMWEYVLATDCFHLGYTAEGHCKGDVNKTLAPPTR 515

  Fly   516 LTWDLKPCLAQIEEATIDVTK-LINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDA 579
            |.||:.....:|.|.:..:.| :.::|:....:..::|||.:||||.||||:||:|||||.|||.
Zfish   516 LQWDIPKACQEIIEGSYRIAKGIADDVDFHGCLFNEFGKGLIKKCRTSPDAFIQLALQLAQYRDK 580

  Fly   580 GRFSLTYEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDA 644
            |.|.||||:||||:||||||||||.||.||:|:|:||::..|||::|:.:.:.|.::||..|:.|
Zfish   581 GEFCLTYESSMTRMFREGRTETVRSCTCESTAFVRAMEDDTTTNEQRLALFKQAAEKHQNMYRLA 645

  Fly   645 MCGRGIDRHLFCLYVVSKYLEVDSPFLNEVLSEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGF 709
            |.|.||||||||||:|||.:.:|||||.:||||||||||||||..|...:|.:|.|..:||||||
Zfish   646 MTGAGIDRHLFCLYIVSKVMGIDSPFLKQVLSEPWRLSTSQTPQQQLNLIDTQKFPKYVSAGGGF 710

  Fly   710 GPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQHMK 767
            ||||||||||||||.|||||.||||:|.:..:||..||.|||.||:.|||::|.|..|
Zfish   711 GPVADDGYGVSYIIVGENLITFHISSKFSSPETDSFRFGQNIRQAMQDIRALFNQKEK 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..47 CDD:465132 25/45 (56%)
Carn_acyltransf 174..753 CDD:459926 315/579 (54%)
cpt1bNP_001315121.1 CPT_N 1..47 CDD:465132 25/45 (56%)
Carn_acyltransf 174..754 CDD:459926 315/579 (54%)

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