DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and crata

DIOPT Version :10

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001005587.1 Gene:crata / 449545 ZFINID:ZDB-GENE-040927-17 Length:631 Species:Danio rerio


Alignment Length:648 Identity:210/648 - (32%)
Similarity:340/648 - (52%) Gaps:79/648 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 VAVVRVLSSWNKPGLY-SFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQT- 212
            |:|.||      .|.| :.|..||:||:|.:|.|..|||.::.|::|.|......:|.::|::. 
Zfish    24 VSVTRV------TGRYLTHQEGLPKLPVPPLKQTCDRYLAALDPIVDPEELNHTRKLLEDFQKPG 82

  Fly   213 -IGKKLQWYLILKSWWSTNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNLTDKQAAR--AAN 274
             :|::||..|..::....|::||||.:..||..|.|:.|:|: .|.....|..:|:|...  ||.
Zfish    83 GVGERLQKGLESRAAKLNNWLSDWWLQTAYLDYRMPVVVHSS-PGVVLPRMEFSDRQGQMRYAAK 146

  Fly   275 VISLLLNFRRLIEHQELQPIMVQGMIPLCSWQYERTFNTARVPGLETDRIIHY----RDSNHIVV 335
            :|:.:|:|:.:|:::.| |:...|..|||..||.:..::.|:||.:.|.:::|    |.|.||.|
Zfish   147 LIAGVLDFKSMIDNETL-PLEYLGGKPLCMHQYYQVLSSCRIPGTKRDTVVNYAMDKRPSTHITV 210

  Fly   336 LHKGCYYKMLIYYK-GRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFS 399
            :|...::.:.:|.. |..|...::.:|:|:|......  ..:|.:..||:.:|:.|.:|.|....
Zfish   211 VHNFQFFVLDVYNSDGTPLTVDQIYIQLEKIWNSSLQ--TNKEPIGILTSNHRNSWGKAYNNLIK 273

  Fly   400 WGVNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNF-----GKKLLHGNGY-----NRWFDKC 454
            ...|:.|:|.|:.:.|.:.|       |...|...|:.     |.::|||.|.     ||||||.
Zfish   274 DKTNKESVRAIQKSIFTVCL-------DAPMPRASDDMYRTRAGVQMLHGGGSRWNSGNRWFDKT 331

  Fly   455 FTVCVGTNGRVGFNAEHTWSD----AAIASHMWENLIVDDLVSDGYDETGNTKGTPAFQPPTPTR 515
            ....:|.:|..|...||..::    .:|..|:.|.:...::|.           ||......|.:
Zfish   332 LQFIIGEDGTCGLIYEHAPAEGPPIVSILDHVVEYMKKSEMVR-----------TPMVPLRMPQK 385

  Fly   516 LTWDLKPCLAQ-IEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDA 579
            |.:::.|.:.: ||:|..::..::::::||:.|...:||.|.|..::||||:|||||||||||..
Zfish   386 LRFNITPEIKKDIEDAKQNMNIMVHDLDLRVNVFTHFGKNFPKSQKMSPDAFIQMALQLAYYRIY 450

  Fly   580 GRFSLTYEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQD- 643
            .|...|||::..|:||.|||:|:|..:.:|:::||||.:|...|.|:|.::..|...|: .|.| 
Zfish   451 KRCCPTYESASLRMFRLGRTDTIRSASSDSASFVKAMDDPVKHNTEKVALLDKAVKAHR-SYTDM 514

  Fly   644 AMCGRGIDRHLFCLYVVSKYLEVDSPFLNEVLSEP-------WRLSTSQTPHGQTPKMDLKKHPN 701
            |:.|:.|||||..|.:  :.:| |...|.|:..:.       :.|||||.|    .|.|      
Zfish   515 AIRGQAIDRHLLGLKL--QAIE-DLAALPEIFMDTSYAVALHYNLSTSQVP----AKTD------ 566

  Fly   702 CISAGGGFGPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQ 764
            |:..   ||||..|||||.| ...:..|.|.:||..:||.|:..|.||.:..||.|:|::.||
Zfish   567 CVMC---FGPVVPDGYGVCY-NPMDTHINFAVSAFNSCQDTNAVRLAQGLEDALLDMRTLLEQ 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..753 CDD:459926 195/610 (32%)
crataNP_001005587.1 Carn_acyltransf 43..614 CDD:459926 195/610 (32%)
Blue background indicates that the domain is not in the aligned region.

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