DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and CPT2

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster


Alignment Length:672 Identity:182/672 - (27%)
Similarity:296/672 - (44%) Gaps:116/672 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PGLYSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSW 226
            |.|| ||.||||||:|.::::..|:|.:.:|||......:.::..::|.|.||.:|  :..|||.
  Fly    37 PTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMEL--HAKLKSH 98

  Fly   227 WS----TNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNLTD------KQAARAANVISLLLN 281
            .:    |:|:|..|.: :||..|:||.:|.|     .:.:..:|      :|..||.|:|...|.
  Fly    99 DAENKHTSYISQPWFD-MYLADRAPLPLNYN-----PLLVMKSDARPEYQQQVVRATNLIISSLR 157

  Fly   282 FRRLIEHQELQPIMVQ------------------------------GMIPLCSWQYERTFNTARV 316
            |.|.::...|:|.:..                              ...||...||.|.|.|:|:
  Fly   158 FWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRI 222

  Fly   317 PGLETDRIIHYRDSNHIVVLHKGCYYKM-LIYYKGRILRPCELQVQIEEILKGKATPVEGEEHLA 380
            |.:..|.::...|:.||:|:.:|..|.: ::...|.|..|..:..::..:||..|........|.
  Fly   223 PRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAASVPLG 287

  Fly   381 ALTAWNRSKWAEARNTFFSWGVNQTSL-RTIESAAFVLSLDDEP---FEFDLARPELLDNFGKKL 441
            .||:..|.:||:.|..|.|...|...| |.:::|.|.:.||.|.   |..:...|.|     |.|
  Fly   288 VLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPLL-----KHL 347

  Fly   442 LHGNGYNRWFDKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDL----VSDGYDETGNT 502
            |.|...||||||..::.:..:|....|.||:|.|.......:..|..|.|    ||   .||.:|
  Fly   348 LAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVS---TETVHT 409

  Fly   503 KGTPAFQPPTPTRLTWDLKPCLAQIEEATIDV--------TKLINEVNLRILVHQDYGKGFMKKC 559
            .....|.         :::|...:|::||...        ..:::.:::.:|.:....|...|:.
  Fly   410 PAEGDFS---------NVRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQY 465

  Fly   560 RISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTND 624
            .:|||:.||::.||||.:....:..:||:..|..||.|||||:||||..:..:.:|:..|..:..
  Fly   466 GLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKP 530

  Fly   625 E--RVKMMQAACDR-HQLGYQDAMCGRGIDRHLFCLYVVSKYLEVDSPFLNEVLSEPWRLSTSQT 686
            .  .::.|...|.: |....::|..|:|.|||||.|...::...:..|.|.|  :|.::      
  Fly   531 SAGELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYK------ 587

  Fly   687 PHGQTPKMDLKKHPNCISA---------GGGFGPVADDGYGVSYIIAGENLIFFHISAKTTCQQT 742
                      :.:.|.||.         .|.||||..:|:|:.|.|..:   |......|...|.
  Fly   588 ----------RINNNIISTSTLGSDALLAGSFGPVVKNGFGIGYSIQND---FAGAIVTTYKNQA 639

  Fly   743 DVHRFAQNISQALSDIRSMFEQ 764
            |...|..::..|...|.::.:|
  Fly   640 DGKVFIDSLESAFDKICAVIQQ 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 174/656 (27%)
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 174/655 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448725
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35481at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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