DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and F41E7.6

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001359551.1 Gene:F41E7.6 / 185624 WormBaseID:WBGene00009622 Length:602 Species:Caenorhabditis elegans


Alignment Length:637 Identity:176/637 - (27%)
Similarity:290/637 - (45%) Gaps:85/637 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 YSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQT-IGKKLQWYLILKSWWS 228
            :|.|.|||.||||.:::|:.:||:|:.|::..:....:..||.:|..: .|:.||.:|..|:..|
 Worm     6 FSEQNSLPSLPLPELEETIGKYLKSLVPIVPKDELETITTLANDFASSQNGQILQRFLKEKTISS 70

  Fly   229 TNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNLTDKQAARAANVISLLLNFRRLIEHQELQP 293
            .|::.|||.: .||..|..| :..|.......|......|...|:::|..|:::..||..::::.
 Worm    71 KNWLEDWWYD-AYLTNRDSL-LTQNMGAVVPKFSVNDSSQIESASHIIHHLMSYWSLIRQEKIEV 133

  Fly   294 IMVQGMIPLCSW---QYERTFNTARVPGLETDRIIHY-------RDSNHIVVLHKGCYYKM-LIY 347
            ...:|.    ||   |....||..|||.|..|||..|       :..:|:::|..|..:|: ...
 Worm   134 TKSRGN----SWDMNQDYNLFNACRVPALPKDRIKRYFRTEAEGKCPSHVIILCNGHVWKLETTC 194

  Fly   348 YKGRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWGVNQTSLRTIE- 411
            ...:.|...|:|..::.|.:...|.||..  :..||:..|..||:.|.:..     |.|.|.:| 
 Worm   195 ENSKFLNIFEIQNALKRIKESSRTSVECS--IVQLTSLGRDNWAQIRESMI-----QNSNRNVEL 252

  Fly   412 -----SAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGNGYNRWFDKCFTVCVGTNGRVGFNAEH 471
                 ||.|.|:|.|:..|.:   .||:    |..:.|:..|.:.||...:.|..:|:....|||
 Worm   253 FHDVDSAVFCLTLSDDFVENE---SELM----KYSIFGSPLNAYCDKNLNIIVLRDGKTCLQAEH 310

  Fly   472 TWSDAAIASHMWENLIVD-DLVSDGY------DETGNTKGTPAFQPPTPTRLTWDLKPCLAQ-IE 528
            ...||.       :|... |..:|.:      .:..:...:.:.||..|.::.:.|...::| |.
 Worm   311 GNVDAI-------SLFAPCDFAADQFQLNRKLSKKSSQNKSSSMQPVMPVKIEFLLTGSVSQKIS 368

  Fly   529 EATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRL 593
            ||..|...|.::.|:.:..:.::|..:.|:..:..|..||:|||:||.:...:.:.|||.:.||:
 Worm   369 EAERDFYFLSSKTNVNVYHYTNFGATYCKQRTLYADTIIQIALQMAYLKTHNKLAPTYETASTRM 433

  Fly   594 FREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLY 658
            |..|||||||..|.:...::.|.:| :.||:....:...|.:.|......|..|:|||||.:.|.
 Worm   434 FYHGRTETVRSLTTDMEKYLTACEN-SATNETLKLLFFDAYNSHNTLMDAAREGKGIDRHFYGLR 497

  Fly   659 VVSKYLE-----VDSPFLNEVL------SEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGFG-- 710
            .....::     |:.|||:...      :..:.||||          .|..|.|     |.||  
 Worm   498 KAQTAIQSYGKSVEIPFLDHKSFSASGGNGNFLLSTS----------FLGYHEN-----GCFGYV 547

  Fly   711 -PVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSM 761
             |:..||||..|.| .:....|.|| ......|:...|.:|:..:|:.|:::
 Worm   548 VPMCKDGYGTFYRI-NKTSFTFTIS-NWLDDATNGDEFRENLEYSLNFIKNV 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 172/627 (27%)
F41E7.6NP_001359551.1 Carn_acyltransf 12..595 CDD:376382 172/627 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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