DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and B0395.3

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_510624.1 Gene:B0395.3 / 181682 WormBaseID:WBGene00007175 Length:614 Species:Caenorhabditis elegans


Alignment Length:625 Identity:171/625 - (27%)
Similarity:289/625 - (46%) Gaps:57/625 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 LPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWSTNYVSDW 235
            ||:||.|....|:..:|...:.|...:.:...:::..:|......|||..|..::....|:::.|
 Worm    22 LPKLPAPQPIKTLKHFLDFAQALQSKKEFQETKQIVNDFVVKDLPKLQELLQKRADALPNWLTPW 86

  Fly   236 WEEYVYLRGRSPLCVNSNFYGTDAIF----MNLTDKQAARAANVISLLLNFRRLIEHQELQPIMV 296
            |....||..|:||.|.::   ...:|    .|..:.|...||.:....::|....::.:|:|.|.
 Worm    87 WLNIAYLAARTPLPVVTS---PGVMFPKFDYNTEEGQLEYAAKISQAAVHFYLRAKNNQLKPDMA 148

  Fly   297 QGMIPLCSWQYERTFNTARVPGLETDRIIH---YRDS-NHIVVLHKGCYYKMLIYYKGRILRPCE 357
             |..||...||:..|.|.|||.:..|.|.:   |::. .||:|:..|..:::.:.....  :|..
 Worm   149 -GKSPLDMSQYQFLFGTTRVPKVGVDEIRYGCDYKEKLQHILVIRNGHLFRVQVLDSNE--QPLS 210

  Fly   358 ---LQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWGVNQTSLRTIESAAFVLSL 419
               :..|:.:::....||  ....:..:::.:|.|||...::......|..||..:|.:.||:.|
 Worm   211 IFAITQQLAKVVSESQTP--NPHPVGIVSSDSRDKWANVYSSLKKDNNNAKSLEAVEKSLFVVCL 273

  Fly   420 D--DEPFEFDLARPELLDNFGKKLLHG-----NGYNRWFDKCFTVCVGTNGRVGFNAEHTWSDAA 477
            |  .||   .:...| .|...::.|||     |..||||||.....:||||..|...|||.::..
 Worm   274 DKASEP---PVGYTE-KDEQSRQALHGGGSKVNSSNRWFDKTIQFVIGTNGYTGMTYEHTPAEGP 334

  Fly   478 IASHMWENLIVDDLVSDGYD-ETGNTKGTPAFQPPTPTRLTWDLKPCLAQIEEATIDVTKLINEV 541
            ....:.      |.:.|.:| .|..|:|||:..|.....::.| :....:|.:::.::..:..::
 Worm   335 PVGALM------DFICDQFDANTFITEGTPSNSPVQRLDISTD-EEINKRIAKSSKNMDSIAEDL 392

  Fly   542 NLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREGRTETVRPCT 606
            ::.....:.|||.|.|..:||||::||||.|||:||.......|||.:..|.|.|||||.:|...
 Worm   393 DIVAFTFKPYGKNFPKSSKISPDSFIQMAYQLAFYRIHSSLPPTYETATLRKFTEGRTENIRSPN 457

  Fly   607 IESSAWVKAM-QNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLYVVSKYLEVDSP- 669
            ..::::||.| ..|.|...|....:..|.:.|:....|.|...|:||||....:::....:.:| 
 Worm   458 TAAASFVKKMVSKPPTPVSEIYDALVHATNSHKKYTMDCMDAAGMDRHLLAWKLIATENNLPTPE 522

  Fly   670 -FLNEVLSE--PWRLSTSQTPHGQTPKMDLKKHPNCISAGGGFGPVADDGYGVSYIIAGENLIFF 731
             |.:.:..:  .:::||||.|.....:|       |      |||.|.|.||:.| ...|..:.|
 Worm   523 IFGSNIYQQLNHFQVSTSQVPTRHFIQM-------C------FGPSALDCYGICY-NPQETELHF 573

  Fly   732 HISAKTTCQQTDVHRFAQNISQALSDIRSMFEQHMKDHPK 771
            .||...:...|...:||:.:.:||.|::|:..:..|:..|
 Worm   574 MISTFKSYGSTSSKKFAKELQKALIDMKSVINKATKEMSK 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 168/611 (27%)
B0395.3NP_510624.1 Carn_acyltransf 22..601 CDD:376382 168/611 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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