DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and T20B3.1

DIOPT Version :10

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001360572.1 Gene:T20B3.1 / 180126 WormBaseID:WBGene00011850 Length:610 Species:Caenorhabditis elegans


Alignment Length:640 Identity:163/640 - (25%)
Similarity:272/640 - (42%) Gaps:95/640 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 YSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQT-IGKKLQWYLILKSWWS 228
            :|.|..||.||:||:.:|:.:|:.|...:|......|:|:.|.||:.: :|.:||..|..::...
 Worm     4 FSRQDQLPSLPVPSLVETLEKYIDSASAILTPAEKARVEKEAHEFQHSELGAQLQSALENRAKNH 68

  Fly   229 TNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNLTDKQAARAANVISLLLNFRRLIEHQELQP 293
            .|::.|||.. .|...|.||....:|...:..:..:...|.:|||:|:...|:....:.|.:...
 Worm    69 KNWLEDWWYN-AYTEIREPLAPYVSFGAMNTAYNCVDGGQVSRAADVLHHWLSVWDKVRHGKWPV 132

  Fly   294 IMVQGMIPLCSW---QYERTFNTARVPGLETDRIIHYRDS-------NHIVVLHKGCYYKMLIYY 348
            ...:|:    :|   |:...|::.|.|....|.:..|..:       .|:::...||::|:.|..
 Worm   133 TSSRGV----TWDMQQFHHLFSSNRTPQRTRDTMDRYFKTKEEGDTPTHVIICCDGCFWKLNILN 193

  Fly   349 K--GRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFS-WGVNQTSLRTI 410
            :  ..|..|.|:...::.:....:.  |....::.||..||..|:..|:.... ...|...:|.:
 Worm   194 EDDDTIKSPDEIYNMLKFVRDNSSD--ESSCCVSKLTTTNRDVWSLNRDELLRVSSANIEYVRAV 256

  Fly   411 ESAAFVLSL------DDEPFEFDLARPELLDNFGKKLLHGNGYNRWFDKCFTVCVGTNGRVGFNA 469
            |::...||:      ||:        .:|:.|    .|....:..|.||...:.:..:.:|....
 Worm   257 ETSILFLSMVPKKGGDDQ--------QKLMSN----ALQDESWFVWQDKSVNITIYEDAQVMVQG 309

  Fly   470 EHTWSDAAIASHMWENLIVDDLVSDGYDE----TGNTKGTPAFQPPTPTRLTWDL-KPCLAQIEE 529
            :|:..||.:.      |.|.|.|:....:    ...|.....|:  .|.||.::. :|....|..
 Worm   310 DHSNIDAIVL------LQVGDYVASRVRKQLWHPAKTGSDLHFE--FPERLIFEFNEPLRHAISF 366

  Fly   530 ATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLF 594
            |.::..|.......|.:.|..||....:..::..|..:|:|||||:.:..|.|:..||.:.||.|
 Worm   367 ADVEFYKSKQLYRARGVHHHGYGNELCRTAKVYTDTVVQLALQLAFLKTHGSFAPIYETASTRKF 431

  Fly   595 REGRTETVRPCTIESSAWVKAMQNPNTTNDER---VKMMQAACDRHQLGYQDAMCGRGIDRHLFC 656
            ..|||||||.||.:...:.||:....|..:|:   .|:..:|.:.|.....|.|.|||.||||..
 Worm   432 FHGRTETVRGCTSQFVRFAKALLGDQTVANEKEDLKKLFDSAINAHNQLMADCMDGRGFDRHLMG 496

  Fly   657 LYVVSKYL------EVDSP-FLNEVLSEPWR---------LSTSQTPH--GQTPKMDLKKHPNCI 703
            |.:....:      :..:| ||.:   :.|:         ||||...:  |..|           
 Worm   497 LKLTLSIMNKGCGPKRQAPEFLRD---DTWKRTGGDGNFLLSTSFIGYMDGNQP----------- 547

  Fly   704 SAGGGFGPVA---DDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQAL 755
               |.||.||   .||||..|.| |::.|...:| .....::::..|..||..||
 Worm   548 ---GTFGYVAAMRPDGYGCFYRI-GKSRISVAVS-DWVSSRSNIDAFCANILWAL 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..753 CDD:459926 157/627 (25%)
T20B3.1NP_001360572.1 Carn_acyltransf 13..593 CDD:459926 155/625 (25%)
Blue background indicates that the domain is not in the aligned region.

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