DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and cpt-6

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_504648.1 Gene:cpt-6 / 179035 WormBaseID:WBGene00020911 Length:746 Species:Caenorhabditis elegans


Alignment Length:744 Identity:245/744 - (32%)
Similarity:389/744 - (52%) Gaps:59/744 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NGVRNGVYPAHIQSLWLIS---AIALGLHFAGYQAPFNLTNRILVHLPSNTINWQVTACFLAALV 109
            |.:.|.::|  |:.:..::   |:|..||   |:.|.|....:|....|.......|.. :||:.
 Worm    32 NWIENTLWP--IKPIPFVATTVALAATLH---YKYPENAILDLLPKFGSEVAEIAKTTA-VAAIG 90

  Fly   110 VWLSICFTMRYTLK-LLLMYKGWMYESRAPGSRVSLPTMLWVAVVRVLSSWNKPGLYSFQGSLPR 173
            .:..: ||:|..|| ....|||:::::   ..:..|.|.:| .:||.:.|.:.|.|.|....||.
 Worm    91 SYAGV-FTLRKLLKHFYFSYKGFLFDN---PKKPCLKTKIW-GIVRHILSISPPILESCDRLLPS 150

  Fly   174 LPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWSTNYVSDWWEE 238
            ||:|::|||::.||.|::.:|.::.|..:.:.|.||.:..|||||.|..:.|.::.|||:.:|::
 Worm   151 LPVPALKDTISEYLDSMKHILSEQEYEIVAKQAHEFLENEGKKLQRYTWIYSLFTDNYVTSFWQK 215

  Fly   239 YVYLRGRSPLCVNSNFYGTDAIFMNLTDKQAA---RAANVISLLLNFRRLIEHQELQPIMVQGMI 300
            |.||.||.||.:||:....|.    |.||:|.   |||.|..:.:.....|:.|:.: .:..|::
 Worm   216 YAYLHGRYPLMINSSVAHCDL----LRDKEATRAHRAARVTWIEVMSHLAIDRQQYK-ALGDGLV 275

  Fly   301 PLCSWQYERTFNTARVPGLETDRIIHYRDSNHIVVLHKGCYYKMLIYYKGRILRPCELQVQIEEI 365
              |:..|:..:...|.||.:.|::|.:....||||:.:|.|||:.:......:...|   |:.:|
 Worm   276 --CTRHYKNMYAVTREPGKKIDQLILHGIQKHIVVVLRGKYYKIHVVDDKNNIYTVE---QLTKI 335

  Fly   366 LKGKATPVEGEE----HLAALTAWNRSKWAEARNTFFSWGV-NQTSLRTIESAAFVLSLDD-EPF 424
            .....:..|.||    .:||||...|..|...|..:|...| |...|:.||.|.|..:||: :.:
 Worm   336 FHEMISRDEKEEGVIGKIAALTHDTRDSWHRNRQKYFLGNVKNAQILKEIECAVFFFTLDENDDY 400

  Fly   425 EFDLARPELLDNFGKKLLHGNGYNRWFDKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVD 489
            .:|..:||:|.||....|.|:|.|||.||........|.|.|...||:.:|.|...|:.||.:..
 Worm   401 GYDEKKPEVLSNFLANCLSGDGTNRWVDKSLNYICSKNARCGGTTEHSIADGAEFDHIMENFVYV 465

  Fly   490 DL---------------VSDGYDETGNTKGTPA-FQPPTPTRLTWDLKPCLAQIEEATIDVTKLI 538
            ||               |.:..|:......||. |:.|....|: ::..|....:.|.       
 Worm   466 DLEVLKYKSIEEQEKMAVIEENDKKSLKLATPLNFEVPDQEMLS-EITRCYDAHQIAK------- 522

  Fly   539 NEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREGRTETVR 603
            |:::|..|..:|:|||.:|||.:||||:||||:|||.|||.|:|.||||.:..|.|...||||:|
 Worm   523 NDLDLYALAFRDFGKGRIKKCGVSPDAFIQMAIQLANYRDQGKFVLTYEPASARFFANSRTETLR 587

  Fly   604 PCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLYVVSKYLEVDS 668
            .....|..:|:||.|.|.|.:.::.:::.||:.|.|..:..|.|:|:|||||.||::|:...:.|
 Worm   588 TVNDHSCEFVEAMLNANETKEAKIALLKKACETHVLRNKKCMVGQGVDRHLFVLYILSQGTGIQS 652

  Fly   669 PFLNEVLSEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGFGPVADDGYGVSYIIAGENLIFFHI 733
            |||:..:::.|:||||..|: .|.:.|.....:....|..||.||.||||:.|...|.:.||.:|
 Worm   653 PFLDNYINQKWKLSTSHVPN-VTNQCDEDTDSDNTWLGACFGAVAADGYGICYRFGGNHGIFANI 716

  Fly   734 SAKTTCQQTDVHRFAQNISQALSDIRSMF 762
            ::..:...||..:||:.:|::..::.::|
 Worm   717 TSYHSAANTDSTKFAKLLSESFHELSNLF 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 211/612 (34%)
cpt-6NP_504648.1 Carn_acyltransf 148..741 CDD:376382 211/611 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56619
OrthoDB 1 1.010 - - D228690at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X480
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.890

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