DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and W03F9.4

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_503145.1 Gene:W03F9.4 / 178543 WormBaseID:WBGene00021002 Length:746 Species:Caenorhabditis elegans


Alignment Length:719 Identity:262/719 - (36%)
Similarity:404/719 - (56%) Gaps:33/719 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SLWLISAIALGLHFAGYQAPFNLTNRILVHLPSNTINWQVTACFLAALVVW----LSICFTMRYT 121
            :||.: ..||.::|      .||..:.|..:....|...:.|..|.:|::.    |::...:|.:
 Worm    42 TLWTV-LDALEMNF------MNLAPKSLEVMAFGIIGTSLLAQTLVSLLIGTVTALTVITVIRCS 99

  Fly   122 LKLLLMYKGWMYESRAPGSRVSLPTMLWVAVVRVLSSWNKPGLYSFQGSLPRLPLPSVKDTMTRY 186
            |.::|.|.||::|.  .|.:.|..|..:..::..:|  .:...:|:||.||.|..|.|:||:.:|
 Worm   100 LIMMLYYNGWLFEE--IGKKPSYATTAFFVILGFIS--KRATFFSYQGILPWLLPPKVEDTVAKY 160

  Fly   187 LRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWSTNYVSDWWEEYVYLRGRSPLCVN 251
            |::::|:|.::.:..:...|:||:.||...||..|.:|...|.||:||||:|.||:|.|..| :.
 Worm   161 LQTMKPILGEKEFLELSEQAEEFKSTIAGGLQNKLWMKWAVSKNYLSDWWKEVVYMRYRDSL-IR 224

  Fly   252 SNFYGTDAIFMNLTDKQAARAANVISLLLNF-RRLIEHQELQPIMVQGMIPLCSWQYERTFNTAR 315
            :|....|.|:...|..||||||.|.....:| ..:.:.::::|:.:.| ||||:.||...:.|.|
 Worm   225 TNVGCADVIYQKTTSNQAARAAYVTLNRQHFCNDIFKSEKMKPVSLGG-IPLCAQQYAEYYRTLR 288

  Fly   316 VPGLETDRIIHYRDSNHIVVLHKGCYYKMLIYYKGRILRPCELQVQIEEIL-KGKATPVEGEEHL 379
            :|...:|::|...|:.||.|.||||:||:.|::..|:::|.||:...:||| .......:||::|
 Worm   289 IPHETSDKMIRLPDAKHIAVYHKGCWYKIDIFHGKRMVKPSELEKSFQEILDSNDHISQQGEKYL 353

  Fly   380 AALTAWNRSKWAEARNTFFS-WGVNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNFGK---K 440
            :|||...|..||..|...|| .||||.||..||::..::.||:|...||   .:....:|:   :
 Worm   354 SALTIGPRDLWARIRTEKFSKGGVNQESLSFIENSLEIVFLDEEERFFD---EDDSTKYGREYAR 415

  Fly   441 LLHGNGYNRWFDKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDLVSDGYDETGNTKGT 505
            .|||:||..|.||........|||...||||:..||.|...:.|.:...:.....|...|:..|:
 Worm   416 ALHGDGYMLWCDKPSVYIFSKNGRFSSNAEHSPCDAMIYVQVREYIKYHEQFESPYGPDGHCVGS 480

  Fly   506 PAFQPPTPTRLTWDL-KPCLAQIEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQM 569
             ....|...||.||: |..|..|:||.|....:.::.:...:|..:|||.||||.::||||||||
 Worm   481 -IEHVPKAERLCWDMDKETLDAIDEAFIISKGVADDFSNANVVFTEYGKDFMKKAKVSPDAYIQM 544

  Fly   570 ALQLAYYRDAGRFSLTYEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAAC 634
            |||:||::|.|:|..|||.::.|||:||||||||.|:|.|..:|:.|...:....::::.::.||
 Worm   545 ALQMAYFKDQGKFEQTYEPAVMRLFKEGRTETVRSCSIWSCDFVRTMLKKDVGAGKKLEKLKEAC 609

  Fly   635 DRHQLGYQDAMCGRGIDRHLFCLYVVSKYLEVDSPFLNEVLSEPWRLSTSQTPHGQTPK--MDLK 697
            |.||..|:.||.|:|:|||||.||||::|||:.:|||..|....|.|||||||..|..:  ..|.
 Worm   610 DHHQDYYRTAMAGKGVDRHLFALYVVARYLEIKTPFLENVFGRNWSLSTSQTPQHQMVEYAKALN 674

  Fly   698 KHPNCISAGGGFGPVADDGYGVSYII--AGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRS 760
            |.|:.....|||.......|||.|.|  .|:.: .||::...:.:.||..||.::|.::|.:|:.
 Worm   675 KEPSLFWPAGGFACPDGSNYGVCYTIGTTGDRM-SFHVTTWNSLENTDSARFLKHILESLREIKD 738

  Fly   761 MFEQ 764
            :.|:
 Worm   739 VVEE 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 233/598 (39%)
W03F9.4NP_503145.1 Carn_acyltransf 145..737 CDD:376382 233/598 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159643
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D228690at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X480
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.810

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