DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and cpt-2

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001040977.2 Gene:cpt-2 / 178025 WormBaseID:WBGene00011122 Length:646 Species:Caenorhabditis elegans


Alignment Length:656 Identity:184/656 - (28%)
Similarity:289/656 - (44%) Gaps:94/656 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 YSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLIL--KSWW 227
            |.||.||.|||:|.:.||:.|||.|.:.:|..:.:.:.|...:.||...|.|||..|:.  |:..
 Worm    36 YHFQKSLRRLPIPKLPDTVNRYLASSKAVLSPDVFAKTEATIRSFEANEGPKLQEALLEYDKAHR 100

  Fly   228 STNYVSDWWEEYVYLRGRSPLCVNSN---FYGTDAIFMNLTDKQAARAANVISLLLNFRRLIEHQ 289
            .|:|:|:.|.: :|||.|.|:.||.|   .|..|.  ....:.|..||.|:.......:|.::..
 Worm   101 DTSYISEPWFD-MYLRARVPVAVNYNPFMMYAPDP--NPKFNDQLTRATNLAISYARIKRSLDEN 162

  Fly   290 ELQP----------------IMVQGMIPLCSW--------------QYERTFNTARVPGLETDRI 324
            .|.|                .:.:.:.|..||              ||:..|..:|:|..|.|.:
 Worm   163 LLGPEVFHMNPKKSDTKLFRTVCKTLPPSLSWFGAVAFKAFPLDMSQYKSLFCGSRIPKKEKDML 227

  Fly   325 IHYRDSNHIVVLHKGCYYKMLIY-YKGRILRPCELQVQIEEIL-KGK-ATPVEGEEHLAALTAWN 386
            .......|.|..:||..|.:.|: ..|::|...::...:..|| .|| |.|   |..:.:||:.:
 Worm   228 YLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWILSNGKEAAP---ESSIGSLTSLD 289

  Fly   387 RSKWAEARNTFFSWGVNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGNGYNRWF 451
            |..|||||....:.| |...|:.|:...|.:.|||...|   ....|:.:.   |:..:..||||
 Worm   290 RDSWAEARVELENAG-NGEYLKKIDGGLFAICLDDLKTE---EHKRLVQSL---LIGDDARNRWF 347

  Fly   452 DKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVD----DLVSDGYDETGNTKGTPAFQPPT 512
            ||||...:..||:...|.||:|.|......:.|....|    ..||.  |:|..:. .||.....
 Worm   348 DKCFQTIIDANGQATINFEHSWGDGVAVLRLMEESFKDTNKNHFVSP--DDTPKSH-NPAHVQAL 409

  Fly   513 PTRLTWDLKPCLAQIEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYR 577
            ..:||..||..::..::..:...   ::::...:..:...:..:||.::|||:.:|:|:|:|:|.
 Worm   410 EFKLTDSLKSKISDAQKKHVSAN---SDLDFATMEFEGLNRDLIKKTKLSPDSVMQLAIQMAFYS 471

  Fly   578 DAGRFSLTYEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQ 642
            ....|..|||:..|..|.:||||.:|..|..:.|...|:...| ..|.|..:...:....|| .:
 Worm   472 LYKEFVPTYESCSTAAFLKGRTECMRSATSATRAATLAILEEN-RKDVRQLLTDCSTQHFQL-VK 534

  Fly   643 DAMCGRGIDRHLFCLYVVSKYLEVDSPFLNEVLSEP-------WRLSTSQTPHGQTPKMDLKKHP 700
            :|..|:|.||||..|.:.::.|...:|   :...:|       :.||||      |...|     
 Worm   535 EASMGQGYDRHLLGLKITAQRLSQPTP---DFFQDPGYTRMGHFVLSTS------TLSTD----- 585

  Fly   701 NCISAGGGFGPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQH 765
              ....||||||..||:|:.|.:....|.....|.|:   :.|...|:..:.::|..:|.    |
 Worm   586 --TIVFGGFGPVVQDGFGIGYNVVPNKLGAVISSNKS---KRDAAAFSNALYKSLDILRG----H 641

  Fly   766 MKDHPK 771
            :.| ||
 Worm   642 LLD-PK 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 175/636 (28%)
cpt-2NP_001040977.2 Carn_acyltransf 42..639 CDD:376382 175/636 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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