DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment whd and CPT2

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_000089.1 Gene:CPT2 / 1376 HGNCID:2330 Length:658 Species:Homo sapiens


Alignment Length:711 Identity:211/711 - (29%)
Similarity:324/711 - (45%) Gaps:139/711 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LMYKGWMYESRAPGSRVSLPTMLWVAVVRVLSSWNKPGLY---------SFQGSLPRLPLPSVKD 181
            |:.:.|   .|.|......|:       |.||:.:.||.|         .:|.||||||:|.::|
Human     5 LLLRAW---PRGPAVGPGAPS-------RPLSAGSGPGQYLQRSIVPTMHYQDSLPRLPIPKLED 59

  Fly   182 TMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLIL--KSWWSTNYVSDWWEEYVYLRG 244
            |:.|||.:.:|||:|..:.:.|:..|.||..|||:|...|:.  |....|:|:|..|.: :||..
Human    60 TIRRYLSAQKPLLNDGQFRKTEQFCKSFENGIGKELHEQLVALDKQNKHTSYISGPWFD-MYLSA 123

  Fly   245 RSPLCVNSN-FYGTDAIFMNLTDKQAARAANVISLLLNFRRLIEHQELQP------------IMV 296
            |..:.:|.| |...:....:..:.|..||.|:....:.|.:.:....|:|            |..
Human   124 RDSVVLNFNPFMAFNPDPKSEYNDQLTRATNMTVSAIRFLKTLRAGLLEPEVFHLNPAKSDTITF 188

  Fly   297 QGMI------------------PLCSWQYERTFNTARVPGLETDRIIHYRDSNHIVVLHKGCYYK 343
            :.:|                  ||...||.|.||:.|:|....|.:.....:.|::||.||.:|.
Human   189 KRLIRFVPSSLSWYGAYLVNAYPLDMSQYFRLFNSTRLPKPSRDELFTDDKARHLLVLRKGNFYI 253

  Fly   344 M-LIYYKGRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWGVNQTSL 407
            . ::...|.|:.|.|:|..::.|| ..::|.. |..||.||:.||..|||.|....|.| |:.||
Human   254 FDVLDQDGNIVSPSEIQAHLKYIL-SDSSPAP-EFPLAYLTSENRDIWAELRQKLMSSG-NEESL 315

  Fly   408 RTIESAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGNGYNRWFDKCFTVCVGTNGRVGFNAEHT 472
            |.::||.|.|.|||.|.: ||.      :....:|||:|.||||||.|.:.:..:|....:.||:
Human   316 RKVDSAVFCLCLDDFPIK-DLV------HLSHNMLHGDGTNRWFDKSFNLIIAKDGSTAVHFEHS 373

  Fly   473 WSDAAIASHMWENLIVDDLVSDGYDETGNTKGTPAFQPPTP------TRLTWDLKPCL------- 524
            |.|.......:..:.        .|.|.....||..||.|.      .:|.::|...|       
Human   374 WGDGVAVLRFFNEVF--------KDSTQTPAVTPQSQPATTDSTVTVQKLNFELTDALKTGITAA 430

  Fly   525 -----AQIEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSL 584
                 |.::..|||..:.           |..||.|:||.::||||..|:|.|:|:.|..|:...
Human   431 KEKFDATMKTLTIDCVQF-----------QRGGKEFLKKQKLSPDAVAQLAFQMAFLRQYGQTVA 484

  Fly   585 TYEASMTRLFREGRTETVRPCTIESSAWVKA-MQNPNTTNDERVKMMQAACDRH--QLGYQDAMC 646
            |||:..|..|:.|||||:||.::.:....:| ::.|:..:...::.|...|.::  ||..:.|| 
Human   485 TYESCSTAAFKHGRTETIRPASVYTKRCSEAFVREPSRHSAGELQQMMVECSKYHGQLTKEAAM- 548

  Fly   647 GRGIDRHLFCLY-------VVSKYLEVDSPF--LNEVLSEPWRLSTSQTPHGQTPKMDLKKHPNC 702
            |:|.|||||.|.       ::...|.:|..:  :|..:     ||||..   .:|.::|      
Human   549 GQGFDRHLFALRHLAAAKGIILPELYLDPAYGQINHNV-----LSTSTL---SSPAVNL------ 599

  Fly   703 ISAGGGFGPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFE 763
                |||.||..||:||.|.: .:|.|..::|   :....:...|.|.:.:||.|   ||:
Human   600 ----GGFAPVVSDGFGVGYAV-HDNWIGCNVS---SYPGRNAREFLQCVEKALED---MFD 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 196/651 (30%)
CPT2NP_000089.1 Carn_acyltransf 49..648 CDD:279140 196/654 (30%)
Coenzyme A binding. /evidence=ECO:0000250 452..464 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.