DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment whd and Crat

DIOPT Version :10

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001407005.1 Gene:Crat / 12908 MGIID:109501 Length:631 Species:Mus musculus


Alignment Length:634 Identity:185/634 - (29%)
Similarity:331/634 - (52%) Gaps:75/634 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 QGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQT--IGKKLQWYLILKSWWSTN 230
            |.:|||||:|.::.::..||::::|::.:|.:...::|..||:.:  :|::||..|..::....|
Mouse    32 QDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMEN 96

  Fly   231 YVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNLTD-----KQAARAANVISLLLNFRRLIEHQE 290
            ::|:||.:..||:.|.|:.:    |.:..:.:...|     .|...||.:|..:|:|:.:|:::.
Mouse    97 WLSEWWLKTAYLQFRQPVVI----YSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNET 157

  Fly   291 LQPIMVQGMIPLCSWQYERTFNTARVPGLETDRIIHY----RDSNHIVVLHKGCYYKMLIYYK-G 350
            | |:...|..|||..||.:..::.||||.:.|.::::    |...||.|:|...::::.:|:. |
Mouse   158 L-PVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDG 221

  Fly   351 RILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWGVNQTSLRTIESAAF 415
            ..|...::.||:|:|......  ..:|.:..||:.:|:.||:|.|......||:.|:.:|:.:.|
Mouse   222 TPLTSDQIFVQLEKIWNSSLQ--SNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIF 284

  Fly   416 VLSLDDEPFEFDLARPELLDNFGK-----KLLHGNGY-----NRWFDKCFTVCVGTNGRVGFNAE 470
            .:.||.:.       |.:.|:..:     ::|||.|.     ||||||.....|..:|..|...|
Mouse   285 TVCLDKQV-------PRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYE 342

  Fly   471 HTWSD----AAIASHMWENLIVDDLVSDGYDETGNTKGTPAFQPPTPTRLTWDLKPCLA-QIEEA 530
            |..::    .|:..|:.|.....:||.           :|....|.|.:|.:::.|.:. .||:|
Mouse   343 HAAAEGPPIVALVDHVMEYTKKPELVR-----------SPMVPLPMPKKLRFNITPEIKNDIEKA 396

  Fly   531 TIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFR 595
            ..:::.:|.::::.:|....:||.|.|..::||||:||:||||||||..|:...|||::..|:|.
Mouse   397 KQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFH 461

  Fly   596 EGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRH-----QLGYQDAMCGRGIDRHL- 654
            .|||:|:|..:|:|.|:||.|.:......::|::::.|...|     ::.:..|:.|...|||| 
Mouse   462 LGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRISHPQAIRGEAFDRHLL 526

  Fly   655 -FCLYVVSKYLEVDSPFLNE--VLSEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGFGPVADDG 716
             ..|..:...:.:...|::.  .::..:.|||||.|    .|.|      |:..   ||||..||
Mouse   527 GLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVP----AKTD------CVMF---FGPVVPDG 578

  Fly   717 YGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQH 765
            ||:.| ...|..|.|.:||..:|.:|:..|.|..:.:||.|:|::.:.|
Mouse   579 YGICY-NPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..753 CDD:459926 176/614 (29%)
CratNP_001407005.1 Carn_acyltransf 38..614 CDD:459926 176/614 (29%)
Microbody targeting signal. /evidence=ECO:0000255 629..631
Blue background indicates that the domain is not in the aligned region.

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