DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and Chat

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_034021.1 Gene:Chat / 12647 MGIID:88392 Length:645 Species:Mus musculus


Alignment Length:645 Identity:198/645 - (30%)
Similarity:313/645 - (48%) Gaps:70/645 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 LPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQT--IGKKLQWYLILKSWWSTNYVS 233
            ||:||:|.::.|:..||:.::.|:.:|.:.:.:.:.|.|...  :|:.||..|:.:...:.|:||
Mouse    24 LPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVS 88

  Fly   234 DWWEEYVYLRGRSPLCVNSNFYGTDAIFMNL----TDKQAARAANVISLLLNFRRLIEHQELQPI 294
            ::|...:||..|..|.|||:   ...||...    |:.|...||::||.:|:::.|::.|.:...
Mouse    89 EYWLNDMYLNNRLALPVNSS---PAVIFARQHFQDTNDQLRFAASLISGVLSYKALLDSQSIPTD 150

  Fly   295 MVQGMI---PLCSWQYERTFNTARVPGLETDRIIHYRDS-----NHIVVLHKGCYYKMLIYYKGR 351
            ..:|.:   |||..||.|.|::.|:||...|.::..:.|     .|::|.....::.:.:....|
Mouse   151 WAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFR 215

  Fly   352 ILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWGVNQTSLRTIESAAFV 416
            .|...:|..|:.:|:|..:...|....:..||:..||:||:||........|:.||..||....:
Mouse   216 RLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICL 280

  Fly   417 LSLDDEPFEFDLARPELLDNFGKKLLHG-----NGYNRWFDKCFTVCVGTNGRVGFNAEHTWSDA 476
            :.||. |...||:.    .:...:||||     ||.|||:||.....||.:|..|...||:..|.
Mouse   281 VCLDG-PGTGDLSD----THRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDG 340

  Fly   477 AIASHMWENLIVDDLVSDGYDETGNTK---GTPAFQPPTPTRLTWDLKP----CLAQIEEATIDV 534
            .:.....|:|:...:       |||.|   .....:.|.|.||.|...|    .||...|....:
Mouse   341 IVLVQCTEHLLKHMM-------TGNKKLVRADSVSELPAPRRLRWKCSPETQGHLASSAEKLQRI 398

  Fly   535 TKLINEVNLRILVHQ--DYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREG 597
            .|     ||..:|::  :|||.|:||.:.|||.:||:||||||||...|...|||::..|.|:||
Mouse   399 VK-----NLDFIVYKFDNYGKTFIKKQKCSPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEG 458

  Fly   598 RTETVRPCTIESSAWVKAMQNPNTT--NDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLYVV 660
            |.:.:|..|.|:.|:|:||.:....  ..|:::::|.|..........|:.|..||.||..|..:
Mouse   459 RVDNIRSATPEALAFVQAMTDHKAAVLASEKLQLLQRAIQAQTEYTVMAITGMAIDNHLLALREL 523

  Fly   661 SKYLEVDSP--FLNE--VLSEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGFGPVADDGYGVSY 721
            ::.|..:.|  |::|  ::|..:.|||||.|  .|.:|      .|.     :|||..:|||..|
Mouse   524 ARDLCKEPPEMFMDETYLMSNRFILSTSQVP--TTMEM------FCC-----YGPVVPNGYGACY 575

  Fly   722 IIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQHMKDHPKP--AKSLTNG 779
            ....| .|.|.||:...|::|....||:.:..:|.|:|.:.........||  ||....|
Mouse   576 NPQPE-AITFCISSFHGCKETSSVEFAEAVGASLVDMRDLCSSRQPAEGKPPTAKERARG 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 192/621 (31%)
ChatNP_034021.1 Carn_acyltransf 24..612 CDD:279140 192/621 (31%)
Coenzyme A binding. /evidence=ECO:0000250 413..425 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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