DRSC/TRiP Functional Genomics Resources

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Protein Alignment whd and cpt2

DIOPT Version :9

Sequence 1:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001007448.1 Gene:cpt2 / 100005717 ZFINID:ZDB-GENE-030131-6719 Length:668 Species:Danio rerio


Alignment Length:661 Identity:193/661 - (29%)
Similarity:322/661 - (48%) Gaps:108/661 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PGLYSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLIL--K 224
            |.:: :|.||||||:|.::||:.|||.:.||||:||.|:..|:||:||:...||:|...|:.  |
Zfish    52 PSMH-YQKSLPRLPVPKLEDTIRRYLAAQRPLLNDEQYSNTEKLAQEFQSGAGKQLHEELVALDK 115

  Fly   225 SWWSTNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIFMNLT-------DKQAARAANVISLLLNF 282
            ....|:|:|..|.: :||..|..:.:|.|      .||:..       :.|..||.|::...:.|
Zfish   116 KNKHTSYISAPWFD-MYLSARESIVLNFN------PFMSFNPDPKPEYNDQLVRATNMVCSAVRF 173

  Fly   283 RRLIEHQELQP----------------IMVQGMIPLCSW--------------QYERTFNTARVP 317
            .:.:....|:|                .:::.:.|..||              ||.|.||:.|:|
Zfish   174 MKTLRAGLLEPEVFHLNPAKSDTDSFKKLIRWVPPSISWFGAYMVNAYPLDMSQYFRLFNSTRIP 238

  Fly   318 GLETDRIIHYRDSNHIVVLHKGCYYKM-LIYYKGRILRPCELQVQIEEILKGKATPVEGEEH-LA 380
            ..:.|.::......|::|:.:|..|.. .:...|.:::|.|:|..::.||:   .|.:.... |.
Zfish   239 KYKRDELLTDDRGRHLLVMKRGNLYVFDALDRDGNLIKPAEVQAHLKYILE---DPTQASAFPLG 300

  Fly   381 ALTAWNRSKWAEARNTFFSWGVNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGN 445
            .||:.||..|...|......| |..:|:.:::|.|.|.||:|     :.|..:  :....:|||:
Zfish   301 VLTSENRDTWTGLRQKLLDAG-NGEALQLVDTALFCLCLDEE-----VLRDHI--HISHNMLHGD 357

  Fly   446 GYNRWFDKCFTVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDD-----LVSDGYDETGNTKGT 505
            |.|||:||.|:|.:..:|:...|.||:|.| .:|...::|.:..|     ||..| .:..:...:
Zfish   358 GCNRWYDKSFSVILAKDGQAAINFEHSWGD-GVAVLRFQNEVFKDTTEKPLVGPG-SQPASVDSS 420

  Fly   506 PAFQPPTPTRLTWDLKPCL-AQIEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQM 569
            .|.:     ||.:.|...| |.|.:|..:....::::.:..:..:..||..:||.::||||..|:
Zfish   421 SAVR-----RLEFKLNDELKAGITKAKENFQAAVSKLTIDAMEFKKGGKEQLKKKKLSPDAIAQL 480

  Fly   570 ALQLAYYRDAGRFSLTYEASMTRLFREGRTETVRPCTIESSAWVKA-MQNPNTTNDERVKMMQAA 633
            |.|:.:.|..|:...|||:..|..|:.|||||:||.:|.:....|| :|.|...:.|::..:...
Zfish   481 AFQMGFLRQYGQTVATYESCSTAAFKHGRTETIRPASIHTKQCAKAFVQQPGQHSVEQLLGLLNE 545

  Fly   634 CDRH--QLGYQDAMCGRGIDRHLFCL-YVV-SKYLEVDSPF-------LNEVLSEPWRLSTSQTP 687
            |.::  ||..:.|| |:|.|||||.: |:. ||.:.:.|.:       :|..:     ||||.. 
Zfish   546 CSKYHGQLTREAAM-GQGFDRHLFAMRYLANSKGMALPSLYQDPAYAAINHNI-----LSTSTL- 603

  Fly   688 HGQTPKMDLKKHPNCISAGGGFGPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNIS 752
              .:|.:.|          |||.||..||:||.|.:..| .|..::|:...   .|||.|.:.:.
Zfish   604 --TSPAVSL----------GGFAPVVPDGFGVGYGVHDE-WIGCNVSSYPA---RDVHEFLRCVH 652

  Fly   753 QALSDIRSMFE 763
            ::|.||.::.:
Zfish   653 KSLEDIFTVLD 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 189/646 (29%)
cpt2NP_001007448.1 Carn_acyltransf 60..659 CDD:279140 189/646 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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