DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11777 and PUB49

DIOPT Version :10

Sequence 1:NP_724939.1 Gene:CG11777 / 36108 FlyBaseID:FBgn0033527 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_201554.1 Gene:PUB49 / 836889 AraportID:AT5G67530 Length:595 Species:Arabidopsis thaliana


Alignment Length:156 Identity:74/156 - (47%)
Similarity:102/156 - (65%) Gaps:1/156 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VTLHTDVGDLKIELFCDACPKACENFLALCASDYYSGCVFIRNIKGFIVQTGDPTNTGKNGQSIW 67
            |...|..|||.|||.||..|:|||||:.||...||:|..|.|:|:.|::|.||||.|||.|:|||
plant   346 VQFQTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIW 410

  Fly    68 GQKFDDEFKETIKHTDRGMVSMANNGPNANASQFFITYAAQPNLDLKYTLFGRVIDGFDALDELE 132
            |:.|.||....:.|:.||:|||||:||:.|.||||:.|.:..:|:.|:|:||.|:.|...|..:|
plant   411 GKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475

  Fly   133 KLPVNPKNYRPHVDKKINGVTIHANP 158
            .:||:..: ||..:.||...::..||
plant   476 NVPVDESD-RPLEEIKIIEASVFVNP 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11777NP_724939.1 Cyclophilin_PPIL3_like 1..154 CDD:238909 72/150 (48%)
PUB49NP_201554.1 RING-Ubox_PPIL2 38..110 CDD:438325
RING_Ubox 101..159 CDD:473075
cyclophilin_RING 345..502 CDD:238904 74/156 (47%)
Blue background indicates that the domain is not in the aligned region.

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