DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11777 and ROC1

DIOPT Version :10

Sequence 1:NP_724939.1 Gene:CG11777 / 36108 FlyBaseID:FBgn0033527 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_195585.1 Gene:ROC1 / 830029 AraportID:AT4G38740 Length:172 Species:Arabidopsis thaliana


Alignment Length:146 Identity:58/146 - (39%)
Similarity:79/146 - (54%) Gaps:18/146 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GDLKIELFCDACPKACENFLALCASD----------YYSGCVFIRNIKGFIVQTGDPT-NTGKNG 63
            |.:.:||:.|..|:..|||.|||..:          ::.|..|.|.|..|:.|.||.| ..|..|
plant    18 GRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGG 82

  Fly    64 QSIWGQKFDDEFKETIKHTDRGMVSMANNGPNANASQFFITYAAQPNLDLKYTLFGRVIDGFDAL 128
            :||:|.||:||..|. |||..|::||||.|.|.|.|||||.......||.|:.:||:|::|.|.:
plant    83 ESIYGSKFEDENFER-KHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVV 146

  Fly   129 DELEKL------PVNP 138
            ..:||:      |..|
plant   147 KAIEKVGSSSGKPTKP 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11777NP_724939.1 Cyclophilin_PPIL3_like 1..154 CDD:238909 58/146 (40%)
ROC1NP_195585.1 cyclophilin_ABH_like 4..169 CDD:238907 58/146 (40%)

Return to query results.
Submit another query.