DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11777 and Ppwd1

DIOPT Version :9

Sequence 1:NP_724939.1 Gene:CG11777 / 36108 FlyBaseID:FBgn0033527 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_001099876.1 Gene:Ppwd1 / 294711 RGDID:1310204 Length:646 Species:Rattus norvegicus


Alignment Length:153 Identity:73/153 - (47%)
Similarity:97/153 - (63%) Gaps:0/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVTLHTDVGDLKIELFCDACPKACENFLALCASDYYSGCVFIRNIKGFIVQTGDPTNTGKNGQSI 66
            |..:||.:||:.|:||...|||..|||.....:.||:|..|.|.||||::||||||.||..|:||
  Rat   493 SAIVHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESI 557

  Fly    67 WGQKFDDEFKETIKHTDRGMVSMANNGPNANASQFFITYAAQPNLDLKYTLFGRVIDGFDALDEL 131
            ||.:|:|||..|::|.....:||||.|.|.|.||||||....|.||.|:|:||||..|.:.:..:
  Rat   558 WGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 622

  Fly   132 EKLPVNPKNYRPHVDKKINGVTI 154
            ..:.||||..:|:.|..|..:|:
  Rat   623 SNVKVNPKTDKPYEDVSIINITV 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11777NP_724939.1 Cyclophilin_PPIL3_like 1..154 CDD:238909 72/151 (48%)
Ppwd1NP_001099876.1 WD40 89..>318 CDD:295369
WD40 <89..311 CDD:225201
WD40 repeat 136..177 CDD:293791
WD40 repeat 191..219 CDD:293791
WD40 repeat 226..277 CDD:293791
WD40 repeat 283..326 CDD:293791
cyclophilin_WD40 495..643 CDD:238908 71/147 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1392223at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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