DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11777 and Ranbp2

DIOPT Version :10

Sequence 1:NP_724939.1 Gene:CG11777 / 36108 FlyBaseID:FBgn0033527 Length:161 Species:Drosophila melanogaster
Sequence 2:XP_038954525.1 Gene:Ranbp2 / 294429 RGDID:1560047 Length:3114 Species:Rattus norvegicus


Alignment Length:135 Identity:59/135 - (43%)
Similarity:80/135 - (59%) Gaps:6/135 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VGDLKIELFCDACPKACENFLALCASDY---YSGCVFIRNIKGFIVQTGDPTN-TGKNGQSIWGQ 69
            :|.:.:|||.:..|:..|||.|||..:.   :...:|.|.:..||.|.||.|. .|..||||:|.
  Rat  2967 LGRIIMELFSNIVPQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGD 3031

  Fly    70 KFDDEFKETIKHTDRGMVSMANNGPNANASQFFITYAAQPNLDLKYTLFGRVIDGFDALDELEKL 134
            ||||| ...:|||..|::||||.|.|.|:||||||.....:||.|:.:||.|.||.|.:.::|..
  Rat  3032 KFDDE-NFDLKHTGPGLLSMANCGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESF 3095

  Fly   135 PVNPK 139
            . :||
  Rat  3096 G-SPK 3099

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11777NP_724939.1 Cyclophilin_PPIL3_like 1..154 CDD:238909 59/135 (44%)
Ranbp2XP_038954525.1 LapB <33..191 CDD:442196
TPR repeat 59..89 CDD:276809
RanBD1_RanBP2-like 1180..1296 CDD:270203
zf-RanBP 1345..1374 CDD:395516
RanBP2-type Zn finger 1350..1369 CDD:275375
zf-RanBP 1410..1438 CDD:395516
RanBP2-type Zn finger 1414..1433 CDD:275375
zf-RanBP 1473..1502 CDD:395516
RanBP2-type Zn finger 1477..1496 CDD:275375
zf-RanBP 1533..1563 CDD:395516
RanBP2-type Zn finger 1537..1556 CDD:275375
zf-RanBP 1596..1625 CDD:395516
RanBP2-type Zn finger 1600..1619 CDD:275375
zf-RanBP 1655..1683 CDD:395516
RanBP2-type Zn finger 1659..1678 CDD:275375
RanBD2_RanBP2-like 1902..2018 CDD:269998
RanBD3_RanBP2-like 2199..2315 CDD:270204
IR1-M 2529..2591 CDD:463488
IR1-M 2605..2665 CDD:463488
RanBD4_RanBP2-like 2815..2931 CDD:269999
cyclophilin_ABH_like 2954..3112 CDD:238907 59/135 (44%)
Blue background indicates that the domain is not in the aligned region.

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