DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caf1-105 and CHAF1B

DIOPT Version :9

Sequence 1:NP_610589.2 Gene:Caf1-105 / 36107 FlyBaseID:FBgn0033526 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_005432.1 Gene:CHAF1B / 8208 HGNCID:1911 Length:559 Species:Homo sapiens


Alignment Length:734 Identity:250/734 - (34%)
Similarity:345/734 - (47%) Gaps:193/734 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKCKIPEISWHNRDPVLSVDIQQNGLGLRSPTICRLASGGSDAHVLIWYVNRSDDAEGVDVELAA 65
            ||....||:|||::||.|:|.|....|    .|.||||.|.|.:|.||.|.:..|.:.: ||..:
Human     1 MKVITCEIAWHNKEPVYSLDFQHGTAG----RIHRLASAGVDTNVRIWKVEKGPDGKAI-VEFLS 60

  Fly    66 DLSRHQRAVNAVRWSPNGELLASGDDESVVFIWKQKADHEVVNIVDADGCSEQ-DKEVWLTLKVL 129
            :|:||.:|||.||:||.||:||||.|::|:.:||...:.|...|...|....| :||.|..:|.|
Human    61 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKTL 125

  Fly   130 RGHREDIYDLSWAPNSQFLVSGSVDNTAMLWDVHSGKSLAILDDHKGYVQGVAWDPCNQYIATMS 194
            |||.||:||:.||.:...:.|.||||||::|||..|:.::|.::||.|||||.|||..||:||:|
Human   126 RGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLS 190

  Fly   195 TDRQMRIFDANTKRVLHRVSKCVLPVKEDHEMHGKSMRLYQDGTLQTFFRRLCFTPDGKLLLTPS 259
            .||.:|::....|||...|||.:..:..:.|  .:|.|::.|.::::|||||.|||||.|||||:
Human   191 CDRVLRVYSIQKKRVAFNVSKMLSGIGAEGE--ARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPA 253

  Fly   260 GITDYDGVVKPINTSYGFSRHDLSKPAFVLPFPKEYAVAVRCSPVLYRLRPYNAEKNPPIISLPY 324
            |..:....|  :||:|.|||.:|.:|...||.|.:..:||||.||.:.|||. .|....::||||
Human   254 GCVESGENV--MNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFELRPV-VETGVELMSLPY 315

  Fly   325 RMIYAVATKNAVFFYDTQQPVPFAIVSNIHYSRLTDLAWSSDGTVLIVSSTDGYCSLITFEPTEL 389
            |:::|||::::|..|||||..||..||||||..|:|::|||||..|.:||||||||.:|||..||
Human   316 RLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDEL 380

  Fly   390 GDCYEDMETVLSVVLKSSENATVLKKKRQKLRKVSLDEPRKPLQEKSKPNTIRRASEAGITEVGE 454
            |           :.||                       .||:.....|:|.::..         
Human   381 G-----------IPLK-----------------------EKPVLNMRTPDTAKKTK--------- 402

  Fly   455 PELDAENDSSTHSVSSNKTNSPKTKASEEEKPTPIAIRRSPRKNSTAPMPIAIRRAPRKPEDKGN 519
                    |.||                                                  :|:
Human   403 --------SQTH--------------------------------------------------RGS 409

  Fly   520 SESSKPKDEMEVTHTKTTQVQKTVASPVKRKVSTEAVPPAETSQPALAVIPVFEKEIISSDDKFE 584
            |...:|             |:.|.||..:...|....||.....||..||         .|....
Human   410 SPGPRP-------------VEGTPASRTQDPSSPGTTPPQARQAPAPTVI---------RDPPSI 452

  Fly   585 SPEKKSRPATPIQVRRQPRTPGSSSQFNLTPKSQPAKQATPIAVRRTPRVLIEMPVNSPVVPMEE 649
            :|..||    |:        ||.|.:..|.|.||..| |.|     :.||.:            .
Human   453 TPAVKS----PL--------PGPSEEKTLQPSSQNTK-AHP-----SRRVTL------------N 487

  Fly   650 AMDAW----PLDESITPLPATKKDSRKPLPETVKTETKPAVIEASEATCERTEDIRLVYEDTQEE 710
            .:.||    |...::|||               ||:|.|:.:..|..:...||:|       |.|
Human   488 TLQAWSKTTPRRINLTPL---------------KTDTPPSSVPTSVISTPSTEEI-------QSE 530

  Fly   711 TPKNPTESGPSTPNNKTPR 729
            |   |.::..|.|..|.||
Human   531 T---PGDAQGSPPELKRPR 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Caf1-105NP_610589.2 WD40 13..377 CDD:295369 169/364 (46%)
WD40 67..446 CDD:225201 166/379 (44%)
WD40 repeat 75..131 CDD:293791 24/56 (43%)
WD40 repeat 136..172 CDD:293791 16/35 (46%)
WD40 repeat 179..213 CDD:293791 17/33 (52%)
WD40 repeat 243..290 CDD:293791 24/46 (52%)
WD40 repeat 358..382 CDD:293791 16/23 (70%)
CHAF1BNP_005432.1 WD 1 11..54 20/46 (43%)
WD40 <13..251 CDD:330360 110/244 (45%)
WD40 repeat 16..64 CDD:293791 20/52 (38%)
WD 2 64..103 20/38 (53%)
WD40 repeat 70..127 CDD:293791 24/56 (43%)
WD 3 127..166 19/38 (50%)
WD40 repeat 132..168 CDD:293791 16/35 (46%)
WD 4 169..208 21/38 (55%)
WD40 repeat 175..230 CDD:293791 23/56 (41%)
WD 5 228..279 26/52 (50%)
WD 6 299..340 20/41 (49%)
WD 7 344..385 25/51 (49%)
CAF-1_p60_C 381..555 CDD:317861 64/344 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..559 61/305 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159662
Domainoid 1 1.000 49 1.000 Domainoid score I11894
eggNOG 1 0.900 - - E1_KOG1009
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48346
Inparanoid 1 1.050 375 1.000 Inparanoid score I2107
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366817at33208
OrthoFinder 1 1.000 - - FOG0004789
OrthoInspector 1 1.000 - - oto89470
orthoMCL 1 0.900 - - OOG6_102357
Panther 1 1.100 - - LDO PTHR15271
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1796
SonicParanoid 1 1.000 - - X3374
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.790

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