DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caf1-105 and Hira

DIOPT Version :10

Sequence 1:NP_610589.2 Gene:Caf1-105 / 36107 FlyBaseID:FBgn0033526 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster


Alignment Length:91 Identity:24/91 - (26%)
Similarity:28/91 - (30%) Gaps:32/91 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 CIWSNRD--------FFSKVTSD--------TSFCAGFKNGT---------SVCN----GDSGGG 514
            |.|.|.|        ..:.|..|        |.|.....|||         .||.    ..|..|
  Fly   146 CFWPNEDLREYTRELIMTTVGQDIENISYVGTRFYIDSVNGTKHFNITAWIGVCQMFFMVGSSMG 210

  Fly   515 MVFKHNNLWYLR---GIVSVSAALQD 537
            .||....:.|||   .|..||.|:.:
  Fly   211 CVFGFGFMCYLRLSNQISMVSMAVNN 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Caf1-105NP_610589.2 WD40 <4..377 CDD:441893
WD40 repeat 75..131 CDD:293791
WD40 repeat 136..172 CDD:293791
WD40 repeat 179..213 CDD:293791
WD40 repeat 243..290 CDD:293791
WD40 repeat 358..382 CDD:293791
PHA03247 <472..742 CDD:223021 24/91 (26%)
HiraNP_572401.2 WD40 14..349 CDD:238121 24/91 (26%)
WD40 repeat 16..68 CDD:293791
WD40 repeat 74..127 CDD:293791
WD40 repeat 132..169 CDD:293791 5/22 (23%)
WD40 repeat 176..211 CDD:293791 8/34 (24%)
WD40 repeat 223..263 CDD:293791 4/14 (29%)
WD40 repeat 275..322 CDD:293791
WD40 repeat 328..350 CDD:293791
HIRA_B 424..442 CDD:462802
Hira 630..828 CDD:462211
Blue background indicates that the domain is not in the aligned region.

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