| Sequence 1: | NP_610589.2 | Gene: | Caf1-105 / 36107 | FlyBaseID: | FBgn0033526 | Length: | 747 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001019912.1 | Gene: | Chaf1b / 288242 | RGDID: | 1307634 | Length: | 572 | Species: | Rattus norvegicus |
| Alignment Length: | 638 | Identity: | 235/638 - (36%) |
|---|---|---|---|
| Similarity: | 328/638 - (51%) | Gaps: | 100/638 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MKCKIPEISWHNRDPVLSVDIQQNGLGLRSPTICRLASGGSDAHVLIWYVNRSDDAEGVDVELAA 65
Fly 66 DLSRHQRAVNAVRWSPNGELLASGDDESVVFIWKQKADHEVVNIVDADGCSEQ-DKEVWLTLKVL 129
Fly 130 RGHREDIYDLSWAPNSQFLVSGSVDNTAMLWDVHSGKSLAILDDHKGYVQGVAWDPCNQYIATMS 194
Fly 195 TDRQMRIFDANTKRVLHRVSKCVLPVKEDHEMHGKSMRLYQDGTLQTFFRRLCFTPDGKLLLTPS 259
Fly 260 GITDYDGVVKPINTSYGFSRHDLSKPAFVLPFPKEYAVAVRCSPVLYRLRPY------NAEKNPP 318
Fly 319 IISLPYRMIYAVATKNAVFFYDTQQPVPFAIVSNIHYSRLTDLAWSSDGTVLIVSSTDGYCSLIT 383
Fly 384 FEPTELGDCYEDMETVLSVVLKSSENATVLKKKRQKLRKVSLDEPRKPLQEKSKPNTIRRASEAG 448
Fly 449 ITEVGEPELDAENDSSTHSVSSNKTNSPK----TKASEEEKPTPIAIRRSPRKNSTAPMPIAIRR 509
Fly 510 APRKPEDKGNSESSKPKDEMEVTHTKTTQ-VQKTVASPVKRKVSTEAVPP-AETSQPALAVIPVF 572
Fly 573 EKEIISSDDKFESPEKKSRPATPIQVRRQPRTPGSSSQFNLTPKSQPAKQATP 625 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Caf1-105 | NP_610589.2 | WD40 | 13..377 | CDD:295369 | 171/370 (46%) |
| WD40 | 67..446 | CDD:225201 | 170/385 (44%) | ||
| WD40 repeat | 75..131 | CDD:293791 | 24/56 (43%) | ||
| WD40 repeat | 136..172 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 179..213 | CDD:293791 | 18/33 (55%) | ||
| WD40 repeat | 243..290 | CDD:293791 | 24/46 (52%) | ||
| WD40 repeat | 358..382 | CDD:293791 | 17/23 (74%) | ||
| Chaf1b | NP_001019912.1 | WD40 | 12..387 | CDD:225201 | 180/383 (47%) |
| WD40 | <13..251 | CDD:295369 | 109/244 (45%) | ||
| WD40 repeat | 16..64 | CDD:293791 | 19/52 (37%) | ||
| WD40 repeat | 70..127 | CDD:293791 | 24/56 (43%) | ||
| WD40 repeat | 132..168 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 175..230 | CDD:293791 | 24/56 (43%) | ||
| WD40 repeat | 237..270 | CDD:293791 | 19/34 (56%) | ||
| WD40 repeat | 278..311 | CDD:293791 | 12/32 (38%) | ||
| WD40 | 321..>400 | CDD:295369 | 49/112 (44%) | ||
| CAF-1_p60_C | 388..561 | CDD:292150 | 47/242 (19%) | ||
| GSK-3_bind | <434..>546 | CDD:283100 | 32/149 (21%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166353713 | |
| Domainoid | 1 | 1.000 | 45 | 1.000 | Domainoid score | I11929 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1009 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H48346 | |
| Inparanoid | 1 | 1.050 | 373 | 1.000 | Inparanoid score | I2053 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D366817at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004789 | |
| OrthoInspector | 1 | 1.000 | - | - | oto96595 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102357 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR15271 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X3374 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.760 | |||||