DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caf1-105 and hira

DIOPT Version :9

Sequence 1:NP_610589.2 Gene:Caf1-105 / 36107 FlyBaseID:FBgn0033526 Length:747 Species:Drosophila melanogaster
Sequence 2:XP_002931950.2 Gene:hira / 100495450 XenbaseID:XB-GENE-976072 Length:1011 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Caf1-105NP_610589.2 WD40 13..377 CDD:295369
WD40 67..446 CDD:225201
WD40 repeat 75..131 CDD:293791
WD40 repeat 136..172 CDD:293791
WD40 repeat 179..213 CDD:293791
WD40 repeat 243..290 CDD:293791
WD40 repeat 358..382 CDD:293791
hiraXP_002931950.2 WD40 7..352 CDD:238121
WD40 repeat 16..68 CDD:293791
WD40 repeat 74..129 CDD:293791
WD40 repeat 134..171 CDD:293791
WD40 repeat 178..213 CDD:293791
WD40 repeat 226..265 CDD:293791
WD40 repeat 273..324 CDD:293791
WD40 repeat 331..353 CDD:293791
HIRA_B 448..470 CDD:370503
Mcl1_mid <708..>782 CDD:372058
Hira 758..948 CDD:369430
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366817at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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