DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp49a1 and cyp27a1.3

DIOPT Version :9

Sequence 1:NP_001246256.1 Gene:Cyp49a1 / 36105 FlyBaseID:FBgn0033524 Length:589 Species:Drosophila melanogaster
Sequence 2:XP_002934001.3 Gene:cyp27a1.3 / 594905 XenbaseID:XB-GENE-18386061 Length:518 Species:Xenopus tropicalis


Alignment Length:568 Identity:173/568 - (30%)
Similarity:259/568 - (45%) Gaps:90/568 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 QRLRTGESSNPKKLNVSQQPVTSVATTRTTASSLPAETTSSPAAAVRPYSEVPGPYPLPLIGNSW 116
            ||||||..:     .:.|....:|.|.|..|:...:..|......::...::|||.||.|:  .|
 Frog     4 QRLRTGAQA-----LLQQSCRANVQTVRKKATLGVSGATVVEGKTLKTLDDLPGPSPLKLL--YW 61

  Fly   117 RFAPLIG-TYKISDLDKVMNELHVNYGKMAKVGG------LIGHPDLLFVFDGDEIRNIFKKEEA 174
            .|  |.| .::..:|..:..:   .||.|.|:..      .:..||||        .::.:||..
 Frog    62 IF--LRGYLFRTHELQVIFKK---TYGPMWKMSDRQHAMVTVASPDLL--------ESLLRKEGK 113

  Fly   175 MPHRPSMPSLRHYKGDLRRDFFGDVAGLIGVHGPKWEAFRQEVQHILLQPQTAKKYIPPLNDIAS 239
            .|.|..|..:|.:: |||...:|.|.    ..|.:|...|..:...:|:|:....|...:|::.|
 Frog   114 YPTRADMFIMREHR-DLRGHSYGPVT----EEGHQWHRIRTILNQRMLKPRETVVYAGSMNEVVS 173

  Fly   240 EFMGRI-ELMRDEKDELPANFLHEL-YKWALESVGRVSLDTRLGCLSPEGSEEAQQIIEAINTFF 302
            :.:.:| ||..........|.:.|| ||:|.||:..|..:||||||:.|...|.|:.|::|....
 Frog   174 DLLLKIKELTAQSSSGTQVNGVAELMYKFAFESICTVLFETRLGCLNKEILPETQKFIDSIGIML 238

  Fly   303 WAVPELELRMPLWRIYPTKA----YRSFVKALDQFTAICMKNIGKTMDKADADEARG-------- 355
            ..:..| .|:|.|    ||.    :..:::|.|.......|.|.|.|:..:....||        
 Frog   239 EHLTML-TRLPQW----TKGILPYWGRYIEAWDTIFDFGKKLIDKKMEDIEGRLKRGEEVEGEYL 298

  Fly   356 --------LSKSEADISIVERIVRKTGNRKLAAILALDLFLVGVDTTSVAASSTIYQLAKNPDKQ 412
                    ||..|...|:||                  |...||||||...:..:|||::||:.|
 Frog   299 TYLLSSGKLSMEEVYGSVVE------------------LLQAGVDTTSNTLTWALYQLSRNPEIQ 345

  Fly   413 KKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPVVIANGRSL-QSDAVINGYHVPKG 476
            ..|:.|:.:|.| .|...:...:.:||.|:|.:|||||:.|||..|.|.: :.:..|..|..|..
 Frog   346 NNLYQEVIRVIP-GETIPDSEAIARMPLLKAVIKETLRLFPVVPENARMINEKEVTIKDYVFPVK 409

  Fly   477 THVIFPHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQKIHPFVSLPFGFGRRMCVGRRF 541
            |..|..|..:|.|...|||..||||||||:.|    |..|     |||.|:|||:|.|.|||||.
 Frog   410 TQFILGHYAISRDETTFPEADRFLPERWLRDS----GMKH-----HPFGSIPFGYGVRACVGRRI 465

  Fly   542 AEIELHTLLAKIFRKYKV--SYNSGEFVYRVNSTYIPQSPLNFKLTLR 587
            ||:|:|..|::|.:.::|  ..:.||...:..:..:...|:|.:...|
 Frog   466 AELEMHLALSRIIKMFQVIPDPDLGEVGAKNRAVLVANRPVNLRFIER 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp49a1NP_001246256.1 p450 104..565 CDD:299894 156/492 (32%)
cyp27a1.3XP_002934001.3 cytochrome_P450 79..508 CDD:425388 148/477 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H36040
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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