DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp49a1 and Cyp26c1

DIOPT Version :9

Sequence 1:NP_001246256.1 Gene:Cyp49a1 / 36105 FlyBaseID:FBgn0033524 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_001098671.1 Gene:Cyp26c1 / 546726 MGIID:2679699 Length:518 Species:Mus musculus


Alignment Length:482 Identity:112/482 - (23%)
Similarity:190/482 - (39%) Gaps:89/482 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 PLPLIGNSWRFAPLIG--TYKISDLDKVMNELHVNYGKMAKVGGLIGHPDLLFVFDGDEIRNIFK 170
            |||.....|   |..|  .:.:....:..:.....||.:.|. .|:|.| ::.|...:.:|.|..
Mouse    48 PLPKGSMGW---PFFGETLHWLVQGSRFHSSRRERYGTVFKT-HLLGRP-VIRVSGAENVRTILL 107

  Fly   171 KEEAMPHRPSMPSLRHYKGDLRRDFFGDVAGLIGVH---GPKWEAFRQ--EVQHILLQPQTAKKY 230
            .|..:. |...|...|.              |:|.|   |...|..||  :|...:....:.:::
Mouse   108 GEHRLV-RSQWPQSAHI--------------LLGSHTLLGAVGEPHRQRRKVLARVFSRSSLEQF 157

  Fly   231 IPPLNDIASEFMGRIELMRDEKDELPANFLHELYKWALESVGRVSLDTRLGCLSPEGSEEAQQII 295
            :|.|..         .|.|:.:....|.....:|:.|.....|::....||....|.     :..
Mouse   158 VPRLQG---------ALRREVRSWCAAQRPVAVYQAAKALTFRMAARILLGLQLDEA-----RCT 208

  Fly   296 EAINTFFWAVPELELRMPLWRIYPTKAYRSFVKALDQFTAICMKNIGKTMDKADADEARGLSKSE 360
            |..:||...|..| ..:||  ..|....|..::|.||        :.:.:|:|.|::.:....:|
Mouse   209 ELAHTFEQLVENL-FSLPL--DVPFSGLRKGIRARDQ--------LYEHLDEAVAEKLQEKQTAE 262

  Fly   361 AD--ISIVERIVRKTGN----RKLAAILALDLFLVGVDTTSVAASSTIYQLAKNPDKQKKLFDEL 419
            ..  :.::....|:.|:    ::|.. ||::|......||:.|::|.|..|.::|....|:..||
Mouse   263 PGDALLLIINSARELGHEPSVQELKE-LAVELLFAAFFTTASASTSLILLLLQHPAAITKIQQEL 326

  Fly   420 QKVFPHR-----------------EADINQNVLEQMPYLRACVKETLRMRPVVIANGRSLQSDAV 467
            ......|                 |.|::..:|.::.|:...|||.||:.|.|....|:......
Mouse   327 SAQGLGRACTCTPRASGSPPDCGCEPDLSLAMLGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFE 391

  Fly   468 INGYHVPKGTHVIF----PHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQKIHPFVSLP 528
            ::||.:|||..|::    .|...:   .|...|:.|.|||:..:|.||.|   :..:.|   .:|
Mouse   392 LDGYQIPKGWSVMYSIRDTHETAA---VYRSPPEGFDPERFGVESGDARG---SGGRFH---YIP 447

  Fly   529 FGFGRRMCVGRRFAEIELHTLLAKIFR 555
            ||.|.|.|:|:..|:..|..|..::.|
Mouse   448 FGGGARSCLGQELAQAVLQLLAVELVR 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp49a1NP_001246256.1 p450 104..565 CDD:299894 112/482 (23%)
Cyp26c1NP_001098671.1 p450 40..500 CDD:386267 112/482 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574756at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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