DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp49a1 and Cyp27b1

DIOPT Version :9

Sequence 1:NP_001246256.1 Gene:Cyp49a1 / 36105 FlyBaseID:FBgn0033524 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_446215.1 Gene:Cyp27b1 / 114700 RGDID:69192 Length:501 Species:Rattus norvegicus


Alignment Length:525 Identity:156/525 - (29%)
Similarity:235/525 - (44%) Gaps:62/525 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LPAETTSSPAAAVRPYSEVPGPYPLPLIGNSWRFAPLIGTYKISDLDKVMNELHVNYGKMAKVGG 149
            ||::..|.  :.:|..|::|||.....:      |.|.....:|.|.::.......||.:  ..|
  Rat    17 LPSQLGSD--SVLRSLSDIPGPSTPSFL------AELFCKGGLSRLHELQVHGAARYGPI--WSG 71

  Fly   150 LIGHPDLLFVFDGDEIRNIFKKEEAMPHRPSMPSLRHYKGDLRRDFFGDVAGLIGVHGPKWEAFR 214
            ..|....::|.|...:..:.::|...|.|.|..|...::...:|     ..||:...|.:|:..|
  Rat    72 SFGTLRTVYVADPALVEQLLRQESHCPERCSFSSWSEHRRRHQR-----ACGLLTADGEEWQRLR 131

  Fly   215 QEVQHILLQPQTAKKYIPPLNDIASEFMGRIELMRDEKDELPANFLH---ELYKWALESVGRVSL 276
            ..:..:||:||.|..|...|:.:.|:.:.|:...|.....||...|.   |.||:.||.:|.|.|
  Rat   132 SLLAPLLLRPQAAAGYAGTLDSVVSDLVRRLRRQRGRGSGLPDLVLDVAGEFYKFGLEGIGAVLL 196

  Fly   277 DTRLGCLSPEGSEEAQQIIEAINTFFWAVPELELRMPLW--RIYPTKAYRSFVKALDQFTAICMK 339
            .:|||||..|...:.:..|||:.:.|.:. .|.:.||.|  |:.| ..:....:..||..|...|
  Rat   197 GSRLGCLEAEVPPDTETFIEAVGSVFVST-LLTMAMPSWLHRLIP-GPWARLCRDWDQMFAFAQK 259

  Fly   340 NIGKTMDKADADEARGLSKSEADISI--------------VERIVRKTGNRKLAAILALDLFLVG 390
            ::.:...:|   ..|...|.|.|:..              |:.||   ||       ..:|.|.|
  Rat   260 HVEQREGEA---AVRNQGKPEEDLPTGHHLTHFLFREKVSVQSIV---GN-------VTELLLAG 311

  Fly   391 VDTTSVAASSTIYQLAKNPDKQKKLFDELQ-KVFPHREADINQNVLEQMPYLRACVKETLRMRPV 454
            |||.|...|..:|:|:::|:.|..|..|:. .|.|...|.:....|.|:|.|:|.:||.||:.||
  Rat   312 VDTVSNTLSWALYELSRHPEVQSALHSEITGAVNPGSYAHLQATALSQLPLLKAVIKEVLRLYPV 376

  Fly   455 VIANGRSLQSDAVINGYHVPKGTHVIFPHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQ 519
            |..|.|....|..:..|.:|:.|.|...|...|.|||.|.||..|.|.|||.:..    .|    
  Rat   377 VPGNSRVPDRDICVGNYVIPQDTLVSLCHYATSRDPAQFREPNSFNPARWLGEGP----AP---- 433

  Fly   520 KIHPFVSLPFGFGRRMCVGRRFAEIELHTLLAKIFRKYKVSYNSGEFVYR--VNSTYIPQSPLNF 582
              |||.|||||||:|.|:|||.||:||...||:|...::|....|....:  ..:..:|:..::.
  Rat   434 --HPFASLPFGFGKRSCIGRRLAELELQMALAQILTHFEVLPEPGALPVKPMTRTVLVPERSIHL 496

  Fly   583 KLTLR 587
            :...|
  Rat   497 QFVDR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp49a1NP_001246256.1 p450 104..565 CDD:299894 148/480 (31%)
Cyp27b1NP_446215.1 CYP27B1 61..496 CDD:410741 143/466 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3026
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I3706
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8942
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.870

Return to query results.
Submit another query.