DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp49a1 and cyp26c1

DIOPT Version :9

Sequence 1:NP_001246256.1 Gene:Cyp49a1 / 36105 FlyBaseID:FBgn0033524 Length:589 Species:Drosophila melanogaster
Sequence 2:XP_031761583.1 Gene:cyp26c1 / 100489980 XenbaseID:XB-GENE-1219115 Length:608 Species:Xenopus tropicalis


Alignment Length:604 Identity:119/604 - (19%)
Similarity:188/604 - (31%) Gaps:213/604 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 TTRTTASSLPAETTSSPAAAVRPYSEVP-GPYPLPLIGNSWRFAPLIGTYKISDLDKVMNELHVN 140
            :||...||||                :| |....|..|.:..:.....::..|..:|        
 Frog    39 STRDRGSSLP----------------LPKGSMGWPFFGETLHWLVQGSSFHSSRREK-------- 79

  Fly   141 YGKMAKVGGLIGHPDLLFVFDGDEIRNIFKKEEAMPHRPSMPSLRHYKGDLRRDFFGDVAGLIGV 205
            ||.:.|. .|:|.| ::.|...:.||.|                                 |:|.
 Frog    80 YGNIFKT-HLLGKP-VIRVTGAENIRKI---------------------------------LLGE 109

  Fly   206 H---GPKWEAFRQEVQHILLQPQTAKKYIPPLNDIASEFMGRIELMRDEKDELPANFLHELYKWA 267
            |   ..:|....|    |:|...|....|..|:....:.|.::......:..||.  :||..:|.
 Frog   110 HHLVSTQWPQSTQ----IILGSNTLSNSIGELHRQKRKMMSKVLSSAALESYLPR--IHEAVRWE 168

  Fly   268 LES----VGRVSLDTRLGCLSPEGSEEAQQII-----------EAINTFFWAVPELELRMPLWRI 317
            :.|    ||.||:   |.|........|.:|:           |...||...|..| ..:||  .
 Frog   169 VRSWCRGVGPVSM---LSCAKALTFRIAARILLGLSLTDTQFQELTRTFEQLVENL-FCLPL--D 227

  Fly   318 YPTKAYRSFVKALDQFTAICMKNIGKTMDKADADEARGLSKSEADISIVERIVRKTG---NRKLA 379
            .|....|..:||.|.......:.|.:.:.|.|.|..      |..:..:....::.|   |.:..
 Frog   228 IPFSGLRKGMKARDTLHQYMEEAIKEKLSKRDPDAC------EDALDYLINSAKEGGKEINMQEL 286

  Fly   380 AILALDLFLVGVDTTSVAASSTIYQLAKNPDKQKKLFDEL---------QKVFPHREADINQNVL 435
            ...|::|......||:.|::|.:..|.|:|....|:..||         ::..|..| :.|.|:|
 Frog   287 KESAIELIFAAFLTTASASTSLVLLLLKHPSAIHKIRQELASHGLSEHCEQCLPATE-NPNNNIL 350

  Fly   436 E-----------QMP-------------------------------------------------- 439
            :           |:|                                                  
 Frog   351 QDNGHQCLTAGCQLPLVMGTEGQVKTLWEQTKQLLTDRTDQDPQNSLSSKNLVNGENRIQEAPCS 415

  Fly   440 -----------------------------------YLRACVKETLRMRPVVIANGRSLQSDAVIN 469
                                               ||...|||.||:.|.|....|:......::
 Frog   416 HDKSNCSPVPGKLQNSVFEGTCQQNISLEKLKSLHYLDCVVKEVLRLLPPVSGGYRTALQTFELD 480

  Fly   470 GYHVPKGTHVIFPHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQKIHPFVSLPFGFGRR 534
            ||.:|||..|::.........|.:...:.|.|||:..:..:.        |:..|..:|||.|.|
 Frog   481 GYQIPKGWSVMYSIRDTHETAAVYQNAEMFDPERFSTERDEG--------KLGRFNYIPFGGGAR 537

  Fly   535 MCVGRRFAEIELHTLLAKI 553
            .|:|:..|:|.|..|..::
 Frog   538 SCIGKELAQIILKILAMEL 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp49a1NP_001246256.1 p450 104..565 CDD:299894 113/577 (20%)
cyp26c1XP_031761583.1 cytochrome_P450 59..588 CDD:425388 110/568 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574756at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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