DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphao and gpa-13

DIOPT Version :9

Sequence 1:NP_523684.2 Gene:Galphao / 36104 FlyBaseID:FBgn0001122 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001256451.1 Gene:gpa-13 / 179746 WormBaseID:WBGene00001675 Length:402 Species:Caenorhabditis elegans


Alignment Length:307 Identity:111/307 - (36%)
Similarity:188/307 - (61%) Gaps:10/307 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QAAKD----IKLLLLGAGESGKSTIVKQMKIIHESGFTAEDFKQYRPVVYSNTIQSLVAILRAMP 89
            |.::|    |:|||||:.||||:|:::|::::::..||..::...|..:|.|..:|:.|:.|||.
 Worm    81 QKSEDPYSHIRLLLLGSAESGKTTVLEQVRLLYKQHFTESEYFHRRAFIYHNIFKSIKALCRAMR 145

  Fly    90 TLSIQYSNNERESDAKMVFDVCQRMHDTEPFSEELLAAMKRLWQDAGVQECFSRSNEYQLNDSAK 154
            ...||:::......|:.:  :.........||::|...:|.:|.|..:|:.::|.:::.|||||.
 Worm   146 MSDIQFADPINMGRAQSI--IADEHGHYGLFSKDLAEKIKHIWNDKSMQKLYARRSQFNLNDSAS 208

  Fly   155 YFLDDLDRLGAKDYQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDV 219
            |||:::|::...||:|:|:|::...|.|.|:..|.|:..|.:|:|||:|||:.:|:||...:|.:
 Worm   209 YFLNNIDKINMVDYKPSERDLIMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGI 273

  Fly   220 TAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIRKSPL 284
            .||.||:|:||||||:.||..|||:.::|.|..||..:..|..|.|.||||:.|:|.||:...||
 Worm   274 DAIFFCIAISEYDQVMSEDMVTNRLDDALNLLQSISEDPAFATTPIYLFLNEIDVFCEKLSVIPL 338

  Fly   285 TICFPEYTGGQEYGEAAAYIQ-AQFEAKNKSTSKEIYCHMTC-ATDT 329
            :...|::.||.: .:|..::: ...||..| ..:.:|....| |.||
 Worm   339 SKYKPDFKGGDQ-DDAIDFMENLACEALGK-RDRSLYRVYRCIAIDT 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaoNP_523684.2 G-alpha 34..348 CDD:206639 109/298 (37%)
gpa-13NP_001256451.1 MRP-S32 <13..>54 CDD:287214
G_alpha 70..397 CDD:214595 111/307 (36%)
G-alpha 90..401 CDD:206639 109/298 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10218
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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