DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphao and gpa-4

DIOPT Version :9

Sequence 1:NP_523684.2 Gene:Galphao / 36104 FlyBaseID:FBgn0001122 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_499921.2 Gene:gpa-4 / 176865 WormBaseID:WBGene00001666 Length:359 Species:Caenorhabditis elegans


Alignment Length:360 Identity:213/360 - (59%)
Similarity:270/360 - (75%) Gaps:7/360 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCAQSAEERAAAARSRLIERNLKEDGIQAAKDIKLLLLGAGESGKSTIVKQMKIIHESGFTAED 65
            |||..|.... |..||:||:..|:.|..:...:|||||||||||||||||:||:|:||:||..::
 Worm     1 MGCFHSTGSE-AKKRSKLIDEQLRHDHERCVGEIKLLLLGAGESGKSTIVRQMRILHETGFNKQE 64

  Fly    66 FKQYRPVVYSNTIQSLVAILRAMPTLSIQYSNNERESDAKMVFDVCQRMHD---TEPFSEELLAA 127
            ...|||||:||.:||::|||:||..|:|.:::..||.||:|.......:::   :|.||.||...
 Worm    65 QMAYRPVVFSNMVQSMLAILKAMQPLNISFTDAAREEDARMFISHFLHVNNAELSEAFSLELSDL 129

  Fly   128 MKRLWQDAGVQECFSRSNEYQLNDSAKYFLDDLDRLGAKDYQPTEQDILRTRVKTTGIVEVHFSF 192
            ||:||.|.||::|..|::||||||||:|:.:.|||:.:..|.||:.||||.|||:|||||..|.:
 Worm   130 MKQLWMDEGVKKCVKRAHEYQLNDSAEYYFNALDRISSSSYLPTQDDILRARVKSTGIVETTFMY 194

  Fly   193 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICNN 257
            |:|.||:|||||||||||||||||:.|||:|||||:||||..|.||:|.|||.||::|||||.||
 Worm   195 KDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEYDLRLAEDQTMNRMHESMQLFDSIVNN 259

  Fly   258 KWFTDTSIILFLNKKDLFEEKIRKSPLTICFPEYTGGQEYGEAAAYIQAQFEAKNK---STSKEI 319
            .|||:|||||||||.|:|||:||.:|||:|||||.||....|.:.:||::||..||   ...|||
 Worm   260 CWFTETSIILFLNKMDIFEERIRYTPLTVCFPEYQGGMTITETSTFIQSRFEILNKRQTPAQKEI 324

  Fly   320 YCHMTCATDTNNIQFVFDAVTDVIIANNLRGCGLY 354
            |.|.|||||||||:||||||||:||.|||..||||
 Worm   325 YSHFTCATDTNNIRFVFDAVTDIIIRNNLYLCGLY 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphaoNP_523684.2 G-alpha 34..348 CDD:206639 196/319 (61%)
gpa-4NP_499921.2 G_alpha 12..357 CDD:214595 204/344 (59%)
G-alpha 33..353 CDD:206639 196/319 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S412
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D406662at33208
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.780

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