DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12895 and SDH5

DIOPT Version :9

Sequence 1:NP_001260868.1 Gene:CG12895 / 36103 FlyBaseID:FBgn0033523 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_014570.1 Gene:SDH5 / 854083 SGDID:S000005432 Length:162 Species:Saccharomyces cerevisiae


Alignment Length:124 Identity:55/124 - (44%)
Similarity:80/124 - (64%) Gaps:15/124 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DYDDPPHLPVPEYPVRP----DEPLETRKQRLLYQSRKRGMLENDLLLSTFVAKHLKDFNAEQTA 101
            |:||    .|....:.|    :|||:.::.||:|||||||:||.|||||.|.||:||..|.|:..
Yeast    42 DHDD----VVTRIKIAPIKRTNEPLDKKRARLIYQSRKRGILETDLLLSGFAAKYLKKMNEEELE 102

  Fly   102 EYDQLINGVSNDWDIFYWAT---DTKPTPPQF-DTEIMRLLKEHVKNHEKVQRIRQPDL 156
            |||.|:|.:  ||||:||||   .|.|.|.:: ::::::.|:|..:|.|| :.:..|||
Yeast   103 EYDSLLNEL--DWDIYYWATKNFKTSPLPDKWANSKLLKQLQEFSENKEK-EILSMPDL 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12895NP_001260868.1 Sdh5 65..138 CDD:281870 39/76 (51%)
SDH5NP_014570.1 SdhE 52..150 CDD:225489 46/99 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341957
Domainoid 1 1.000 79 1.000 Domainoid score I2044
eggNOG 1 0.900 - - E1_COG2938
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32370
Inparanoid 1 1.050 96 1.000 Inparanoid score I1493
Isobase 1 0.950 - 0 Normalized mean entropy S1158
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003243
OrthoInspector 1 1.000 - - otm46674
orthoMCL 1 0.900 - - OOG6_102226
Panther 1 1.100 - - O PTHR12469
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1299
SonicParanoid 1 1.000 - - X3172
TreeFam 1 0.960 - -
1514.730

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